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Job DescriptionP76041
Confidence100.00%DateThu Jan 5 12:17:40 GMT 2012
Rank37Aligned Residues450
% Identity16%Templatec2wanA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pullulanase; PDBTitle: pullulanase from bacillus acidopullulyticus
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30... ......40.........50.........60 .........70
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Query Sequence  EIYGGTFTATHLQKLVTRLESAK. . . RLITQRRKKHWDESDVVLITYADQFHS. . . . . . . . . . . . . . . . . NDLKPLPTFN
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Template Sequence  DPYARAISVNATRGMIVDLKATDPAGWQGDHEQTPANPVDEVIYEAHVRDFSIDANSGMKNKGKYLAFTEHGTKGPDHVK
Template Known Secondary structure 
TT
SSBSGGGSS


GGGGS
TTGGG





SSGGG



STTS

SSTTSGGGGG

S
B
GGG
B
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   393......400.........410.........420.........430.........440.........450.........460.........470..
 
   71........80.........90.... .....100.........110.. .......120.... .....
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Query Sequence  QFYHQWLQSIFSHVHLLPFYPWSS. . . . . . . . . DDGFSVIDYHQVASEAGE. . . . . . . WQDIQQLGECSH. . . . . LMFDF
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Template Sequence  TGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGVNMDV
Template Known Secondary structure 
T

S

SSS
TTSTTS




S
GGGSS
SSTTTT
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   473......480.........490.........500.........510.........520.........530.........540.........550..
 
   130.........140.........150.........160.........170.........180.........190.........200.........
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Query Sequence  VCNHMSAKSEWFKNYLQQHPGFEDFFIAVDPQTDLSAVTRPRALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRSPEVLL
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Template Sequence  VYNHTFDVMVSDFDKI. . . . . VPQYYYRTDSNGNYTN. . . . . . . . . . . . . . . . . . . . . . . . . . . GSGGNEFATEHPMAQK
Template Known Secondary structure 
TT

S
SSSS.....STTTTB
B
TTS
B

...........................TT



B
TTS
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   553......560........ .570.........580.... .....590.........600
 
   210......... 220.........230.........240.........250.........260.........270.........280...
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Query Sequence  AMVDVLLCYL. AKGAEYVRLDAVGFMWKEPGTSCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYF. . . . .
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Template Sequence  FVLDSVNYWVNEYHVDGFRFDLMALL. . . . . . . . . . . . . GKDTMAKISNELHAINPGIVLYGEPWTGGTSGLSSDQLVTK
Template Known Secondary structure 


TTGGGG.............

TT

SS
SS

SS
TTTS

T
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   602.......610.........620....... ..630.........640.........650.........660........
 
   284.....290.........300...... ...310.........320.... .....330.........340.........350
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Query Sequence  GAGDDEAHMVYQFSLPPLVLHAV. . . . . . . . . . . QKQNVEALCAWAQNLTLP. . SSNTTWFNFLASHDGIGLNPLRGLLP
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Template Sequence  GQQKGLGIGVFNDNIRNGLDGNVFDKTAQGFATGDPNQVDVIKNGVIGSIQDFTSAPSETINYVTSHDNMTLWDKI. . . .
Template Known Secondary structure  TTTTTTT



TT
TT


TTTT
SS
BTTTTTT
SSGGG
S

SSS

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   669670.........680.........690.........700.........710.........720.........730.........740....
 
   351........360.........370.........380.........390.........400.........410.........420.........430
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Query Sequence  ESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALSRRESSDEERCARFILAHAILLSFPGVPAIYIQSILGSR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LASNPSDTEADRIKMDELAHAVVFTSQGVPFMQGGEEMLRT
Template Known Secondary structure  .......................................
TTS
SBSTTGGGT

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   745....750.........760.........770.........780.....
 
   431........440.........450.........460.........470.........480.........490. ........500....
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Query Sequence  NDYAGVEKLGYNRAINRKKYHSKEITRELNDEATLRHAVYHELSRLITLRRSHNEFHPDNN. . . . . . FTIDTINSSVMRI
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Template Sequence  . . . KGGNDNSYNAGDSVNQFDWSRKA. . . . . . . . QFKDVFDYFSSMIHLRNQHPAFRMTTADQIKQNLTFLESPTNTVAF
Template Known Secondary structure  ...
TT
S

TT

S

T........T
GGGG

S



TT
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   786...790.........800........ .810.........820.........830.........840.........850....
 
   505.... 510.........520.........530.........540...... ...550.........
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Query Sequence  PRSNA. . . . DGNCLTGLFNVSKNIQHVNITNLHGRDLISEVDILGN. . . . . . . EITLRPWQVMWIK
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Template Sequence  ELKNYANHDTWKNIIVMYNPNKTSQTLNLPSGDWTIVGLGDQIGEKSLGHVMGNVQVPAISTLILK
Template Known Secondary structure 
SSGGG
SSS

SSS


SS
TTSSS
S

S
SS
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   855....860.........870.........880.........890.........900.........910.........920
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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