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Job DescriptionP76041
Confidence71.46%DateThu Jan 5 12:17:40 GMT 2012
Rank193Aligned Residues156
% Identity13%Templatec2oylB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:endoglycoceramidase ii; PDBTitle: endo-glycoceramidase ii from rhodococcus sp.: cellobiose-like2 imidazole complex
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.. .......120.... .....130.........140
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Query Sequence  QFYHQWLQSIFSHVHLLPFYPWSSDDGFSVIDYHQVASEAGE. . . . . WQDIQQLGECSH. . . . . LMFDFVCNHMSAKSEW
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Template Sequence  DLAREYADMGTNFVRF. . . . . . . . . . . . . LISWRSVEPAPGVYDQQYLDRVEDRVGWYAERGYKVMLDM. . . HQDVYSGA
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SBTTB

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   7980.........90.... .....100.........110.........120.........130.... .....140..
 
   141........150.........160.........170.........180.........190.........200.... .....210..
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Query Sequence  FKNYLQQHPGFEDFFIAVDPQTDLSAVTRPRALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRS. . . . . . . . PEVLLAMV
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Template Sequence  ITP. . . . . . . . . . . . . . . GAGAIGNGAPAWATYMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWR
Template Known Secondary structure  G

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SSSBSS
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SSGGGGGGSTTSSSS
T
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   143.. ....150.........160.........170.........180.........190.........200.......
 
   213......220. ........230.........240...... ...250.........260.........270.
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Query Sequence  DVLLCYLAK. GAEYVRLDAVGFMWKEPGTSCIHLE. . . . . . . . . . . . . KTHLIIKLLRSIIDNVAPGTVIITE
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Template Sequence  AVADRFADNDAVVAYDL. . . . . . . . . . . . . . MNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVA
Template Known Secondary structure  TT
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   214.....220.........230 .........240.........250.........260.........270..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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