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Job DescriptionP76041
Confidence100.00%DateThu Jan 5 12:17:40 GMT 2012
Rank50Aligned Residues463
% Identity18%Templatec2fhfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pullulanase; PDBTitle: crystal structure analysis of klebsiella pneumoniae2 pullulanase complexed with maltotetraose
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20......... 30.........40.........50.........60... ......
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Query Sequence  DEIYGGTFTATHLQKLVTRL. . . . . . . . . . ESAKRLITQRRKKHWDESDVVLITYADQFHSNDL. . . . . . . KPLPTF. . .
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Template Sequence  TDPYAHSLSTNSEYSQVVDLNDSALKPEGWDGLTMPHAQKTKADL. AKMTIHESHIRDLSAWDQTVPAELRGKYLALTAQ
Template Known Secondary structure 

TT
S
B
GGGSS
B
TT
GGGS
TTGGG


SS

SS.T

TT
TTS
GGGTTSGGGGG
T
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   377..380.........390.........400.........410.........420. ........430.........440.........450.....
 
   70.........80.........90....
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Query Sequence  . . . . NQFYHQWLQSIFSHVHLLPFYPWSS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ESNMVQHLKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEVNSAVKSSEFAGYCDSGSTVEEVLTQLKQND
Template Known Secondary structure  TST

S

SSS


GGG


TTSB
TSTTGGGTTSS
BSTT
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   456...460.........470.........480.........490.........500.........510.........520.........530.....
 
   95....100.........110.. .......120.... .....130.........140.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . DDGFSVIDYHQVASEAGE. . . . . . . WQDIQQLGECSH. . . . . . LMFDFVCNHMSAKSEWF
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Template Sequence  SKDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSYATDPEGTARIKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTD
Template Known Secondary structure  BTTB
TTSSS






STTSS

STTTS


TTS

SSS
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   536...540.........550.........560.........570.........580.........590.........600.........610.....
 
   142.......150.........160.........170.........180.........190.........200.........210......... 220
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Query Sequence  KNYLQQHPGFEDFFIAVDPQTDLSAVTRPRALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYL. A
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Template Sequence  RTSVLDKIV. PWYYQRLNETTGSVE. . . . . . . . . . . . . . . . . . . . . . . . . . SATCCSDSAPEHRMFAKLIADSLAVWTTD
Template Known Secondary structure  TT

S.TTTSB
B
TTT

B
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TTSSB
TTS
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   616...620.... .....630......... 640.........650.........660........
 
   221........230.........240.........250.........260.........270.........280.........290... ....
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Query Sequence  KGAEYVRLDAVGFMWKEPGTSCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGAGDDEAHMV. . . YQFS
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Template Sequence  YKIDGFRFDLMLYH. . . . . . . . . . . . . PKAQILSAWERIKALNPDIYFFGEGWDSNQSDRFEIASQINLKGTGIGTFSDR
Template Known Secondary structure 


TTGGGS.............BTT
TT





S
TTTS
B

TTTTTTSS

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   669670.........680.. .......690.........700.........710.........720.........730.....
 
   298.300.........310.........320...
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Query Sequence  LPPLVLHAVQKQNVEALCAWAQNLTL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation                  
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Template Sequence  LRDAVRGGGPFDSGDALRQNQGVGSGAGVLPNELTTLSDDQARHLADLTRLGMAGNLADFVLIDKDGAVKRGSEIDYNGA
Template Known Secondary structure 
S
TT

TT


GGGTTTTS

SS



TT
BTT

TTS
GGGSTT
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   736...740.........750.........760.........770.........780.........790.........800.........810.....
 
   324.....330.........340.........350.........360.........370.........380.........390.........
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Query Sequence  . . . . PSSNTTWFNFLASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALSRRESSDE
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Template Sequence  PGGYAADPTEVVNYVSKHDNQTLWDMISY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KAAQEADLD
Template Known Secondary structure  S

BSSGGG
S

SSSS
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TT

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   816...820.........830.........840.... .....850...
 
   400.........410.........420.........430.........440.........450... .
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Query Sequence  ERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYHSK. . . . . . . . . . . . . . . . . . . . . . . . . E
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Template Sequence  TRVRMQAVSLATVMLGQGIAFDQQGSELLRS. . . KSFTRDSYDSGDWFNRVDYSLQDNNYNVGMPRSSDDGSNYDIIARV
Template Known Secondary structure  TSSSTTGGGT

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TT
S

TTS


TT
S

S
SSS


GGG
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   854.....860.........870.........880.... .....890.........900.........910.........920.........930
 
   455....460.........470.........480.........490..... ....500.........510. ....
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Query Sequence  ITRELNDEATLRHAVYHELSRLITLRRSHNEFHPDNNFTID. . . . . . . . . . TINSSVMRIPRSNADG. . . . . . . . . NCLT
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Template Sequence  KDAVATPGETELKQMTAFYQELTALRKSSPLFTLGDGATVMKRVDFRNTGADQQTGLLVMTIDDGMQAGASLDSRVDGIV
Template Known Secondary structure  TTSS



TS
GGGG


S
STT

TT
STTTSS
S
TT
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   931........940.........950.........960.........970.........980.........990.........1000.........1010
 
   516...520.........530........ .540.........550........
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Query Sequence  GLFNVSKNIQHVNITNLHGRDLI. . . . . . . . . . . . . SEVDILGNEITLRPWQVMWI
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Template Sequence  VAINAAPESRTLQDFAGTSLQLSAIQQAAGDRSLASGVQVAADGSVTLPAWSVAVL
Template Known Secondary structure 
SSS

TTSSS


TGGGSTTTT

TTS

TT
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   1011........1020.........1030.........1040.........1050.........1060......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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