Return to main results Retrieve Phyre Job Id

Job DescriptionP76041
Confidence100.00%DateThu Jan 5 12:17:40 GMT 2012
Rank72Aligned Residues413
% Identity13%Templatec1wpcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glucan 1,4-alpha-maltohexaosidase; PDBTitle: crystal structure of maltohexaose-producing amylase complexed with2 pseudo-maltononaose
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90... ......100... ......110.....
Predicted Secondary structure 





















..









.........








Query SS confidence 














































. .









. . . . . . . . .











Query Sequence  SDVVLITYADQFHSNDLKPLPTFNQFYHQWLQSIFSHVHLLPFYPWS. . SDDGFSVIDY. . . . . . . . . HQVASEAGEWQD
Query Conservation    


 
    
       
      



  


  
 
 


 
 .. 
 


  

.........  


  

 

Alig confidence 















.





























..









.........











Template Conservation         
 
      .     
  




  







 

         

   
 
          
    

  
Template Sequence  NGTMMQYFEWYLPNDG. NHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQ
Template Known Secondary structure 





TT

SSS.
T




SSSTT

S
STT
SS
S
BTTBSS
SS

Template Predicted Secondary structure 







.









































Template SS confidence 















































































   6...10.........20. ........30.........40.........50.........60.........70.........80....
 
   116...120.... .....130..... ....140...... ...150........
Predicted Secondary structure 
.....





..


..............................








Query SS confidence 








. . . . .










. .










. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .











Query Sequence  IQQLGECSH. . . . . LMFDFVCNHMS. . AKSEWFKNYLQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QHPGFEDFFIAV
Query Conservation 

 

   
.....



 
 



..    

     ..............................      
 
   
Alig confidence 








.....










..










..............................











Template Conservation 
  

  

  

 





 

                                                         
Template Sequence  LQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDG
Template Known Secondary structure  TT


S
S
STT
S

B

TTTTTSS



B
GGG
Template Predicted Secondary structure 





























































Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   159160.........170.........180.........190.........200.........210......... 220.........230.......
Predicted Secondary structure 









































.








Query SS confidence 




























































.

















Query Sequence  DPQTDLSAVTRPRALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYL. AKGAEYVRLDAVGFMWKE
Query Conservation                                    
    



  

 

  
      

.  







 
  
   
Alig confidence 




























































.














...
Template Conservation                                        
 


  
  
          
    








   
...
Template Sequence  VDWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHI. . .
Template Known Secondary structure  S

TTT

SS

STT



SS


TTS




SS
TT
T
STTGGGS...
Template Predicted Secondary structure 





















































...
Template SS confidence 















































































   165....170.........180.........190.........200.........210.........220.........230.........240.
 
   238.240.........250.........260 .........270.........280.........290.........300.........310......
Predicted Secondary structure 









.

























Query SS confidence 






















.























































Query Sequence  PGTSCIHLEKTHLIIKLLRSIID. NVAPGTVIITETNVPHKDNIAYFGAGDDEAHMVYQFSLPPLVLHAVQKQNVEALCA
Query Conservation                    
    .   
    


                                          
  
Alig confidence  ..........












.























































Template Conservation  ..........           
           

                       

 
   
           
  
Template Sequence  . . . . . . . . . . KYSFTRDWINHVRSATGKNMFAVAEFWKNDLGAIENYLQKTNWNHSVFDVPLHYNLYNASKSGGNYDMRN
Template Known Secondary structure  ..........
T






S
TTT
S
TTTT
S
GGG
Template Predicted Secondary structure  ..........




















Template SS confidence 















































































   242.......250.........260.........270.........280.........290.........300.........310.
 
   317..320.........330.........340.........350.........360.........370.........380.........390......
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  WAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALSRRES
Query Conservation                  

 


                                    
                     
Alig confidence 






































.........................................
Template Conservation                
 

 


  
              .........................................
Template Sequence  IFNGTVVQRHPSHAVTFVDNHDSQPEEALESFVEEWFKP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTT

GGG
S

TTTSTTSTT




TTT.........................................
Template Predicted Secondary structure 
















.........................................
Template SS confidence 















































































   312.......320.........330.........340.........350
 
   397..400.........410.........420.........430.........440.........450.........460.........470......
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  SDEERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYHSKEITRELNDEATLRHAVYHELSRL
Query Conservation         
  

  
 

 

 
 





 
           
      
    
                
    
 
Alig confidence  .........






























................................







Template Conservation  .........

 
 

 
  


 





 
        ................................       
Template Sequence  . . . . . . . . . LAYALTLTREQGYPSVFYGDYYGIPTHGVPA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MRSKIDPI
Template Known Secondary structure  .........SSSSS
BGGGTB

................................
Template Predicted Secondary structure  .........













................................
Template SS confidence 















































































   351........360.........370.........380. ........
 
   477..480.........490.........500.........510... ......520.........530 .........540..
Predicted Secondary structure 













....






....





......
Query SS confidence 




































. . . .
















. . . .











. . . . . .
Query Sequence  ITLRRSHNEFHPDNNFTIDTINSSVMRIPRSNADGNC. . . . LTGLFNVSKNIQHVNIT. . . . NLHGRDLISEVD. . . . . .
Query Conservation 
 


  


  
           
 
  
       .... 


 
 
       
 ....      
     ......
Alig confidence 








...








.














....
















....











......
Template Conservation    


    ...
        .  
 

 
            

  
         
     
    
        
   
Template Sequence  LEARQKYAY. . . GKQNDYLDH. HNIIGWTREGNTAHPNSGLATIMSDGAGGSKWMFVGRNKAGQVWSDITGNRTGTVTIN
Template Known Secondary structure  T

...S


S.SS


TTSTT

SSS


GGGTT
TTSSS
S

Template Predicted Secondary structure 


...


.





























Template SS confidence 















































































   390........ .400....... ..410.........420.........430.........440.........450.........460.....
 
   543......550..... ....
Predicted Secondary structure  .






.
Query SS confidence  .












.



Query Sequence  . ILGNEITLRPWQV. MWIK
Query Conservation  .     
 
 

  . 


Alig confidence  .












.



Template Conservation    
     
   
  
 
 
Template Sequence  ADGWGNFSVNGGSVSIWVN
Template Known Secondary structure  TTS
TT
Template Predicted Secondary structure 




Template SS confidence 


















   466...470.........480....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions