 |
Job Description | P77569 | Confidence | 78.86% | Date | Thu Jan 5 12:30:40 GMT 2012 |
Rank | 498 | Aligned Residues | 38 |
% Identity | 18% | Template | d2esna1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| LysR-like transcriptional regulators
|
Resolution | 2.10 |
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | G | L | M | L | L | N | M | L | N | K | L | D | G | G | A | S | V | G | L | L | A | E | L | S | G | L | H | R | T | T | V | R | R | L | L | E | T | L | Q | E |
Query Conservation |   |
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |   |
|
|   |   |
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |
|   |   |   |   | . | . | . |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |
Template Sequence |   |
N | L | L | L | V | F | D | A | L | Y | R | H | R | . |
. |
. |
N | V | G | T | A | A | S | E | L | A | I | S | A | S | A | F | S | H | A | L | G | R | L | R | Q |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |  | S | . | . | . | S |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|