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Job Description | P77569 | Confidence | 83.67% | Date | Thu Jan 5 12:30:40 GMT 2012 |
Rank | 424 | Aligned Residues | 86 |
% Identity | 20% | Template | d2esha1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| PadR-like
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Resolution | 2.30 |
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19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | M | L | L | N | M | L | N | K | L | D | G | G | A | S | V | G | L | L | A | E | L | S | . |
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G | L | H | R | T | T | V | R | R | L | L | E | T | L | Q | E | E | G | Y | V | R | R | S | P | S | D | . |
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D | S | F | R | L | T | I | K | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | T | I | L | L | L | V | A | E | . |
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K | P | S | H | G | Y | E | L | A | E | R | L | A | E | F | G | I | E | I | P | G | I | G | H | M | G | N | I | Y | R | V | L | A | D | L | E | E | S | G | F | L | S | T | E | W | D | T | T | V | S | P | P | R | K | I | Y | R | I | T | P | Q | G | K | L | Y | L | R | E | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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16 | . | . | . | 20 | . | . | . | . | |
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. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
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83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F | R | D | E | Q | W | I | S | A | L | A | A | P | L | L | G | D | L | L | R | E | V | V | W |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | R | S | L | E | D | M | K | R | R | I | E | T | L | E | E | R | I | K | R | V | L | Q | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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