 |
Job Description | P77569 | Confidence | 81.03% | Date | Thu Jan 5 12:30:40 GMT 2012 |
Rank | 470 | Aligned Residues | 38 |
% Identity | 11% | Template | d2d6ya1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Tetracyclin repressor-like, N-terminal domain
|
Resolution | 2.30 |
|
  |   |
20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | L | L | N | M | L | N | K | L | D | . |
G | G | A | S | V | G | L | L | A | E | L | S | G | L | H | R | T | T | V | R | R | L | L | E | T | L | Q | E |
Query Conservation |   |
  |
|
|
|   |
|
|   |   |   | . |   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |   |
|
|   |   |
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |   |   |
|   |   |
|   |   |
|   |   |
Template Sequence |   |
A | A | V | A | E | F | A | R | H | G | I | A | G | A | R | I | D | R | I | A | A | E | A | R | A | N | K | Q | L | I | Y | A | Y | Y | G | N | K | G | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T | S |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  | S | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|