Job Description P77569 Confidence 94.22% Date Thu Jan 5 12:30:40 GMT 2012 Rank 223 Aligned Residues 55 % Identity 18% Template d1xmaa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.30

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		L	M	L	L	N	M	L	N	K	L	D	G	G	A	S	V	G	L	L	A	E	L	S	.	.	.	.	.	.	.	.	G	L	H	R	T	T	V	R	R	L	L	E	T	L	Q	E	E	G	Y	V	R	R	.	.	.	.	.	S	P	S	D	D	S	F	R	L	T	I	K
Query Conservation																									.	.	.	.	.	.	.	.																							.	.	.	.	.
Alig confidence											.	.													.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation											.	.
Template Sequence		T	I	I	L	S	L	L	I	E	.	.	G	D	S	Y	G	Y	E	I	S	K	N	I	R	I	K	T	D	E	L	Y	V	I	K	E	T	T	L	Y	S	A	F	A	R	L	E	K	N	G	Y	I	K	S	Y	Y	G	E	E	T	K	R	R	T	Y	Y	R	I	T	P	E
Template Known Secondary structure											.	.																	T	T	S																		T	T	S
Template Predicted Secondary structure											.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions