Job Description P77569 Confidence 100.00% Date Thu Jan 5 12:30:40 GMT 2012 Rank 9 Aligned Residues 170 % Identity 22% Template d1mkma2 SCOP info Profilin-like GAF domain-like IclR ligand-binding domain-like Resolution 2.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	S	A	L	A	A	P	L	L	G	D	L	L	R	E	V	V	W	P	T	D	V	S	T	L	D	V	D	A	M	V	V	R	E	T	T	H	R	F	S	R	L	S	F	H	R	A	M	V	G	R	R	L	P	L	L	K	T	A	S	G	L	T	W	L	A	F	C	P	E	Q	D	R	K	E	L	I	E	M
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		N	I	R	D	I	A	H	D	H	L	V	D	I	M	K	R	T	G	E	T	V	H	L	I	L	K	D	G	F	E	G	V	Y	I	D	K	V	E	G	E	Q	S	I	P	M	.	V	S	R	L	G	M	K	V	D	L	Y	S	T	A	S	G	K	S	I	L	A	F	V	P	E	K	E	L	K	E	Y	L	K	I
Template Known Secondary structure																	T	T		S									S	S											T	T	S				.	S			S	S					S	S	S	S										S
Template Predicted Secondary structure																																															.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		L	A	S	R	P	G	D	D	Y	Q	L	A	R	E	P	L	K	L	E	A	I	L	A	R	A	R	K	E	G	Y	G	Q	N	Y	R	G	W	D	Q	E	E	K	I	A	S	I	A	V	P	L	R	S	E	.	Q	R	V	I	G	C	L	N	L	V	Y	M	A	S	A	M	T	I	E	Q	A	A	E	K	H	L
Query Conservation																																																							.
Alig confidence														.																							.	.																	.																					.
Template Conservation														.																							.	.																																						.
Template Sequence		V	E	L	K	P	K	T	P	N	T	I	T	.	N	P	R	V	L	K	R	E	L	E	K	I	R	K	R	G	Y	A	V	D	N	E	.	.	E	N	E	I	G	I	M	C	V	G	V	P	I	F	D	H	N	G	Y	P	V	A	G	V	S	I	S	G	V	A	R	K	F	T	E	E	K	.	I	E	E	Y	S
Template Known Secondary structure							S	S	T	T				.																S	S					S	.	.	S	S	S	T	T											T	T	S												G	G	G						.
Template Predicted Secondary structure														.																							.	.																																						.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	Q	R	V	A	K	Q	I	E	E	G	V	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	L	K	E	K	A	E	E	I	S	R	K	L	G	Y
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions