 |
Job Description | P77569 | Confidence | 87.42% | Date | Thu Jan 5 12:30:40 GMT 2012 |
Rank | 328 | Aligned Residues | 52 |
% Identity | 13% | Template | d1cf7a_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Cell cycle transcription factor e2f-dp
|
Resolution | 2.60 |
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | L | L | N | M | L | N | K | L | D | G | G | . |
A | S | V | G | L | L | A | E | L | S | G | L | . |
H | R | T | T | V | R | R | L | L | E | T | L | Q | E | E | G | Y | V | R | R | S | P | S | D | D | S | F | R | L |
Query Conservation |   |
  |
|
|
|   |
|
|   |   |   |   |   | . |   |
|
|   |
|
|
|   |   |
|   |
| . |   |   |
|
|   |   |
|
|
|   |
|
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|   |
|   |   |
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|   |
|   |   |
|
| . |   |   |   |
|
Template Sequence |   |
K | F | V | S | L | L | Q | E | A | K | D | G | V | L | D | L | K | L | A | A | D | T | L | A | V | R | Q | K | R | R | I | Y | D | I | T | N | V | L | E | G | I | G | L | I | E | K | K | S | K | N | . |
S | I | Q | W |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S | S | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  | T | T | . |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
. | . | 80 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|