Job Description P77569 Confidence 100.00% Date Thu Jan 5 12:30:40 GMT 2012 Rank 12 Aligned Residues 174 % Identity 13% Template c3obfA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative transcriptional regulator, iclr family; PDBTitle: crystal structure of putative transcriptional regulator, iclr family;2 targeted domain 129...302 Resolution 2.16 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Q	W	I	S	A	L	A	A	P	L	L	G	D	L	L	R	E	V	V	W	P	T	D	V	S	T	L	D	V	D	A	M	V	V	R	E	T	T	H	R	F	S	R	L	S	F	H	R	A	M	V	G	R	R	L	P	L	L	K	T	A	S	G	L	T	W	L	A	F	C	P	E	Q	D	R	K	E	L
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		S	N	A	E	E	R	R	V	A	Y	P	V	L	R	E	L	T	E	R	T	G	E	T	S	A	L	X	V	W	N	G	N	E	S	X	C	V	E	Q	I	P	S	R	H	Q	V	K	H	.	L	A	P	L	G	A	R	Y	N	E	A	L	S	S	S	V	Q	V	F	L	A	S	E	N	E	D	R	V	R	Q	L
Template Known Secondary structure																						S	S									S	S											T	T		S	S		.		S		T	T					B	T	T	S									T	S
Template Predicted Secondary structure																																																		.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		I	E	M	L	A	S	R	P	G	D	D	Y	Q	L	A	R	E	P	L	K	L	E	A	I	L	A	R	A	R	K	E	G	Y	G	Q	N	Y	R	G	W	D	Q	E	E	K	I	A	S	I	A	V	P	L	R	S	.	E	Q	R	V	I	G	C	L	N	L	V	Y	M	A	S	A	M	T	I	E	Q	A	A	E
Query Conservation																																																									.
Alig confidence								.									.																							.	.																.																						.
Template Conservation								.									.																							.	.																																						.
Template Sequence		L	R	S	G	S	I	.	T	L	T	G	V	D	E	D	.	A	V	E	A	Y	L	L	R	L	K	E	S	X	E	R	G	W	A	V	N	F	G	.	.	E	T	S	I	E	E	V	G	V	A	S	P	V	Y	D	H	R	G	N	X	V	A	S	V	L	I	P	A	P	K	F	R	V	S	Q	D	T	.	L	N
Template Known Secondary structure					T	S	S	.	B		T	T					.																T	S					S	.	.	S	S	S	T	T											T	T	S												G	G	G						.
Template Predicted Secondary structure								.									.																							.	.																																						.
Template SS confidence
		205	.	.	.	.	210		.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	L	P	A	L	Q	R	V	A	K	Q	I	E	E	G	V	E	S	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	G	E	A	C	A	A	A	A	A	K	V	T	T	R	L	G	G	R	A
Template Known Secondary structure																		T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions