Phyre 2 alignment of Q46925 with d2ctza1

Job Description Q46925
Confidence 99.91% Date Thu Jan 5 12:35:54 GMT 2012

Rank 173 Aligned Residues 333

% Identity 13% Template d2ctza1

SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like

Resolution 2.60

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M
Query Conservation
Alig confidence																															.	.	.																					.	.	.	.
Template Conservation																															.	.	.																					.	.	.	.
Template Sequence	A	L	K	E	F	G	N	I	Y	S	R	I	M	N	P	T	V	D	V	L	E	K	R	L	A	A	L	E	G	G	.	.	.	K	A	A	L	A	T	A	S	G	H	A	A	Q	F	L	A	L	T	T	L	.	.	.	.	A	Q	A	G	D	N	I	V	S	T	P	N	L	Y	G	G	T	F	N	Q	F	K	V
Template Known Secondary structure	T	T	T	T	G	G	G	S		B	T	T	B																T		.	.	.	S						S	S													.	.	.	.			T	T							S												T
Template Predicted Secondary structure																															.	.	.																					.	.	.	.
Template SS confidence
	44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

	129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V
Query Conservation
Alig confidence																	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence	T	L	K	R	L	G	I	E	V	R	F	T	S	R	E	E	.	.	.	.	R	P	E	E	F	L	A	L	T	D	E	K	T	R	A	W	W	V	E	S	I	G	N	P	A	L	N	I	P	D	L	E	A	L	A	Q	A	A	R	E	K	G	V	A	L	I	V	D	N	T	F	G	M	G	G	Y	L	L	R	P
Template Known Secondary structure					T	T								T	T		.	.	.	.											T	T								S	S		T	T	T																	T								G	G	G	G	G	G	T	S			G
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
	117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

	209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.								.	.	.	.	.	.
Query SS confidence																					.	.	.								.	.	.	.	.	.
Query Sequence	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	.	.	.	I	G	V	L	Y	G	K	.	.	.	.	.	.	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V
Query Conservation																					.	.	.								.	.	.	.	.	.
Alig confidence																					.	.	.								.	.	.	.	.	.
Template Conservation
Template Sequence	L	A	W	G	A	A	L	V	T	H	S	L	T	K	W	V	G	G	H	G	A	V	I	A	G	A	I	V	D	G	G	N	F	P	W	E	G	G	R	Y	P	L	L	T	E	P	Q	P	G	Y	H	G	L	R	L	T	E	A	F	G	E	L	A	F	I	V	K	A	R	V	D	G	L	R	D	Q	G	Q	A	L
Template Known Secondary structure	G	G	G	T		S						T	T	T	T	T	T		S	S											S		S			T	T	T	T						S		B	G	G	G	T	T	B							G	G	G									T
Template Predicted Secondary structure
Template SS confidence
	193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.																			.	.	.	.	.	330	.	.	.	.	.			.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	S	L	L	A	F	D	F	A	G	.	.	V	H	H	S
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence	G	P	F	E	A	W	V	V	L	L	G	M	E	T	L	S	L	R	A	E	R	H	V	E	N	T	L	H	L	A	H	W	L	L	E	Q	P	Q	V	A	W	V	N	Y	P	G	L	P	H	H	P	H	H	D	R	A	Q	K	Y	F	K	G	K	P	G	A	V	L	T	F	G	L	K	G	G	Y	E	A	A	K
Template Known Secondary structure													T	T																					T		T	T							T	T	S	T	T		T	T									T	T				S							T	T
Template Predicted Secondary structure
Template SS confidence
	273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.																.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	R	F	I	S	R	L	K	L	I	S	H	L	A	N	V	G	D	T	R	T	L	A	I	H	P	A	S	T	T	H	S	Q	L	S	P	E	E	Q	A	Q	A	G	V	S	P	E	M	V	R	L	S	V	G	L	E	H	V	E	D	L	K	A	E	L	K	E	A	L
Template Known Secondary structure					T		S	S	S				S					S	S						G	G	G	T	T	T	T	T	S									T			T	T								S	S													T
Template Predicted Secondary structure
Template SS confidence
	353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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