Job Description Q46925 Confidence 99.90% Date Thu Jan 5 12:35:54 GMT 2012 Rank 180 Aligned Residues 340 % Identity 15% Template d2csta_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.								.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.
Query Sequence		Y	L	D	S	A	A	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	.	.	.	.	.	.	.	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I
Query Conservation																																																											.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		Y	R	T	D	E	G	Q	P	W	V	L	P	V	V	R	K	V	E	Q	L	I	A	G	D	G	S	L	N	H	E	Y	L	P	.	.	.	.	.	.	.	I	L	G	L	P	E	F	R	A	N	A	S	R	I	A	L	G	D	D	S	P	A	I	A	Q	K	R	V	G	S	V	Q	G	L	G	G	T	G	A	L
Template Known Secondary structure					T	T	S																			T	T								.	.	.	.	.	.	.	T	T																T	T						T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		95	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																																																							.	.	.
Query SS confidence											.	.	.																																																							.	.	.
Query Sequence		N	M	V	A	Q	C	Y	A	R	.	.	.	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	.	.	.	T	P	R	S	R	I	L	A	L	G	Q
Query Conservation											.	.	.																																																							.	.	.
Alig confidence											.	.	.																										.																													.	.	.
Template Conservation																																							.
Template Sequence		R	I	G	A	E	F	L	R	R	W	Y	N	G	N	N	N	T	A	T	P	V	Y	V	S	S	P	T	W	E	N	H	N	S	V	F	M	D	.	A	G	F	K	D	I	R	T	Y	R	Y	W	D	A	A	K	R	G	L	D	L	Q	G	L	L	D	D	M	E	K	A	P	E	F	S	I	F	I	L	H	A	C
Template Known Secondary structure												S	S	S	S	S		T	T	S						S	S			T									.	T	T												T	T	T	T													T	S		T	T							S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		169	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.											.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.
Predicted Secondary structure												.	.	.																														.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence												.	.	.																														.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		M	S	N	V	T	G	G	C	P	D	.	.	.	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	.	.	.	.	.	.	.	.	.	.	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	.	.	I	G	V	L	Y
Query Conservation												.	.	.																														.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence												.	.	.																														.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		A	H	N	P	T	G	T	D	P	T	P	D	E	W	K	Q	I	A	A	V	M	K	R	R	C	L	F	P	F	F	D	S	A	Y	Q	G	F	A	S	G	S	L	D	K	D	A	W	A	V	R	Y	F	V	S	E	G	F	E	L	F	C	A	Q	S	F	S	K	N	F	G	L	Y	N	E	R	V	G	N	L	S
Template Known Secondary structure		S		T	T	T																				T								S		T	T	T	T	T	S						T									T	T										T	T	T	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	.	.	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A
Query Conservation																																																											.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	G	K	D	E	D	N	V	Q	R	V	L	.	.	.	.	.	.	.	.	.	.	.	S	Q	M	E	K	I	V	R	T	T	W	S	N	P	P	S	Q	G	A	R	I	V	A	T	T	L	T	S	P	Q	L	F	A	E	W	K	D	N	V	K	T	M	A	D	R	V	L	L	M	R	S	E	L	R	S	R
Template Known Secondary structure					S	S									.	.	.	.	.	.	.	.	.	.	.									T	T	T	S	S			S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.												.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		312	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		L	A	K	R	P	G	.	.	.	F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L
Query Conservation								.	.	.
Alig confidence								.	.	.																	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																											.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		L	E	S	L	G	T	P	G	T	W	N	H	I	T	D	Q	I	G	M	F	S	F	T	G	L	.	.	.	N	P	K	Q	V	E	Y	M	I	K	E	K	H	I	Y	L	M	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	I	N	M	C	.	G	L	T	T	K	N	L	D	Y	V
Template Known Secondary structure						T		S	S			T							S	S							.	.	.											T	T						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	.	G			T	T	T
Template Predicted Secondary structure																											.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.				.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.																	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400
		389	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	A	V	D	R	A	L	E	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	S	I	H	E	A	V	T	K	I	Q
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions