Job Description Q46925 Confidence 99.85% Date Thu Jan 5 12:35:54 GMT 2012 Rank 210 Aligned Residues 323 % Identity 16% Template d2ay1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.20

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		Y	L	D	S	A	A	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	.	.	.	.	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V
Query Conservation																																																												.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		Y	K	D	A	T	G	H	T	P	I	M	R	A	V	H	A	A	E	Q	R	M	L	E	T	E	T	T	K	T	Y	A	G	L	S	G	E	.	.	.	.	.	.	.	.	P	E	F	Q	K	A	M	G	E	L	I	L	G	D	G	L	K	S	E	T	T	A	T	L	A	T	V	G	G	T	G	A	L	R	Q	A
Template Known Secondary structure					T	T	S																											S	S			.	.	.	.	.	.	.	.													G	G	G			G	G	G
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																															.	.																		.	.	.
Query SS confidence																																															.	.																		.	.	.
Query Sequence		A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	.	.	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	.	.	.	R	S	R	I	L	A	L	G	Q	M	S	N	V
Query Conservation																																															.	.																		.	.	.
Alig confidence						.	.																									.	.	.	.												.	.																		.	.	.
Template Conservation						.	.																									.	.	.	.
Template Sequence		L	E	L	A	.	.	R	M	A	N	P	D	L	R	V	F	V	S	D	P	T	W	P	N	H	V	S	I	M	N	.	.	.	.	F	M	G	L	P	V	Q	T	Y	R	Y	F	D	A	E	T	R	G	V	D	F	E	G	M	K	A	D	L	A	A	A	K	K	G	D	M	V	L	L	H	G	C	C	H	N	P
Template Known Secondary structure						.	.					T	T								S											.	.	.	.			T											T	T	T	T													T			T	T							S	S	S		T	T
Template Predicted Secondary structure						.	.																									.	.	.	.
Template SS confidence
		116	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		173	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.										.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.
Predicted Secondary structure								.	.	.																															.	.	.	.	.	.	.	.	.																					.	.								.	.	.
Query SS confidence								.	.	.																															.	.	.	.	.	.	.	.	.																					.	.								.	.	.
Query Sequence		T	G	G	C	P	D	.	.	.	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	.	.	.	.	.	.	.	.	.	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	.	.	I	G	V	L	Y	G	K	.	.	.
Query Conservation								.	.	.																															.	.	.	.	.	.	.	.	.																					.	.								.	.	.
Alig confidence								.	.	.																															.	.	.	.	.	.	.	.	.																					.	.								.	.	.
Template Conservation
Template Sequence		T	G	A	N	L	T	L	D	Q	W	A	E	I	A	S	I	L	E	K	T	G	A	L	P	L	I	D	L	A	Y	Q	G	F	G	D	G	L	E	E	D	A	A	G	T	R	L	I	A	S	R	I	P	E	V	L	I	A	A	S	C	S	K	N	F	G	I	Y	R	E	R	T	G	C	L	L	A	L	C	A	D
Template Known Secondary structure		T																				T										T	T	S	S	S																	S	S								T	T	T	T	T		G	G	G										S	S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
						236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	T	R	E	L	A	Q	G	A	M	A	F	L	N	R	Q	T	Y	S	F	P	P	F	H	G	A	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	T	V	L	T	T	P	E	L	R	A	D	W	M	A	E	L	E	A	V	R	S	G	M	L	R	L	R	E	Q	L	A	G	E
Template Known Secondary structure																		T	T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.																	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		312	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.																													.
Query SS confidence								.	.	.																													.
Query Sequence		L	A	K	R	P	G	.	.	.	F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	G	V	H	H	S	D	M	V	T	L	L	.	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A
Query Conservation								.	.	.																													.
Alig confidence								.	.	.																		.	.	.	.								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		L	R	D	L	S	G	S	D	R	F	G	F	V	A	E	H	R	G	M	F	S	R	L	G	A	T	.	.	.	.	P	E	Q	V	K	R	I	K	E	E	F	G	I	Y	M	V	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	I	N	I	A	.	G	L	N	D	N	T	I	P	I
Template Known Secondary structure							T	S	S	T	T	T							S	S								.	.	.	.																	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	.	G			T	T	T
Template Predicted Secondary structure																												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.					.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.																	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	A	V	D	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	R	A	I	I	E	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions