Job Description Q46925 Confidence 99.95% Date Thu Jan 5 12:35:54 GMT 2012 Rank 101 Aligned Residues 346 % Identity 15% Template d1w7la_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.0

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		17	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure															.																																																			.	.
Query SS confidence															.																																																			.	.
Query Sequence		Q	D	A	G	V	Y	L	D	S	A	A	T	A	.	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	.	.	D	D	K	T	I	V	W	T	R	G	T	T	E	S
Query Conservation															.																																																			.	.
Alig confidence															.																	.	.	.																																.	.
Template Conservation																																.	.	.
Template Sequence		E	H	D	V	V	N	L	G	Q	G	F	P	D	F	P	P	P	D	F	A	V	E	A	F	Q	H	A	V	S	G	.	.	.	D	F	M	L	N	Q	Y	T	K	T	F	G	Y	P	P	L	T	K	I	L	A	S	F	F	G	E	L	L	G	Q	E	I	D	P	L	R	N	V	L	V	T	V	G	G	Y	G	A
Template Known Secondary structure		T	S									S		S	S														T	S	S	.	.	.		G	G	G	G	S				T	T																		T													S
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.										.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.
Query Sequence		I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	.	.	.	.	.	.	.	.	.	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L
Query Conservation																																																							.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																							.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																							.	.	.	.
Template Sequence		L	F	T	A	F	Q	A	L	.	.	.	.	V	D	E	G	D	E	V	I	I	I	E	P	F	F	D	C	Y	E	P	M	T	M	.	.	.	.	M	A	G	G	R	P	V	F	V	S	L	K	P	G	P	G	E	L	G	S	S	S	N	W	Q	L	D	P	M	E	L	A	G	K	F	T	S	R	T	K	A	L
Template Known Secondary structure										.	.	.	.			T	T								S			T	T							.	.	.	.		T	T															S			G	G	G														T	T
Template Predicted Secondary structure										.	.	.	.																							.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																		.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	.	.	.	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	.	.	.	.	.	.	.	.	.	A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L
Query Conservation																		.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	N	T	P	N	N	P	L	G	K	V	F	S	R	E	E	L	E	L	V	A	S	L	C	Q	Q	H	D	V	V	C	I	T	D	E	V	Y	Q	W	M	V	Y	D	G	H	Q	H	I	S	I	A	S	L	P	G	M	W	E	R	T	L	T	I	G	S	A	G	T	F	S	A	T	G	W	K	V	G	W	V
Template Known Secondary structure					S	S		T	T	T																				T								T	T	T	T		B		T	T						G	G	G	S	T	T	T	G	G	G											S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290							.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.
Query Sequence		Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	.	.	.	.	.	.	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T
Query Conservation																																																												.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	P	D	H	I	M	K	H	L	R	T	V	H	Q	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	H	C	P	T	Q	S	Q	A	A	V	A	E	S	F	E	R	E	Q	L	L	F	R	Q	P	S	S	Y	F	V	Q	F	P	Q	A	M	Q	R	C	R	D
Template Known Secondary structure																	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S																				T	T	T	S	T	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.																						.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.															.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	H	H	S	D	M	V	T	L	L	.	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																							.
Template Conservation											.																																																																			.
Template Sequence		H	M	I	R	S	L	Q	S	V	.	G	L	K	P	L	I	P	Q	G	S	Y	F	L	I	T	D	I	S	D	F	K	R	K	M	P	D	L	P	G	A	V	D	E	P	Y	D	R	R	F	V	K	W	M	I	K	N	K	G	L	V	A	I	P	V	S	I	F	Y	S	V	P	H	Q	K	H	F	.	D	H	Y
Template Known Secondary structure									T	T	.	T							S	B	S	S																				T	T																						G	G	G	G	S						T	T	S	.		S
Template Predicted Secondary structure											.																																																																			.
Template SS confidence
		319	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		I	R	F	C	F	V	.	.	K	D	E	A	T	L	Q	A	M	D	E	K	L	R	K	W	K	V	E
Template Known Secondary structure								.	.
Template Predicted Secondary structure								.	.
Template SS confidence
		397	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions