Job Description Q46925 Confidence 99.95% Date Thu Jan 5 12:35:54 GMT 2012 Rank 95 Aligned Residues 361 % Identity 11% Template d1vp4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.82

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.
Predicted Secondary structure										.												.	.	.																																																					.	.
Query SS confidence										.												.	.	.																																																					.	.
Query Sequence		F	R	A	Q	F	P	A	L	.	Q	D	A	G	V	Y	L	D	S	A	A	.	.	.	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	.	.	D	D	K
Query Conservation										.												.	.	.																																																					.	.
Alig confidence										.												.	.	.																																	.	.																			.	.
Template Conservation																																																									.	.
Template Sequence		I	R	E	I	L	K	F	A	A	D	K	D	A	I	S	F	G	G	G	V	P	D	P	E	T	F	P	R	K	E	L	A	E	I	A	K	E	I	I	E	K	E	Y	H	Y	T	L	Q	Y	S	T	T	E	G	D	.	.	P	V	L	K	Q	Q	I	L	K	L	L	E	R	X	Y	G	I	T	G	L	D	E	D
Template Known Secondary structure						T	T	T	T	T	S	T	T								S			G	G	G	S																S					T	S				T	T			.	.																			S			G	G
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.									.	.	.	150	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	.	.	.	.	.	.	.	.	L	P	D	V	D	L	L	P
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																							.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.																							.	.	.	.
Template Sequence		N	L	I	F	T	V	G	S	Q	Q	A	L	D	L	I	G	K	L	F	.	.	.	.	L	D	D	E	S	Y	C	V	L	D	D	P	A	Y	L	G	A	I	N	A	F	R	.	.	.	.	Q	Y	L	A	N	F	V	V	V	P	L	E	D	D	G	X	D	L	N	V	L	E	R	K	L	S	E	F	D	K	N
Template Known Secondary structure		G																			.	.	.	.			T	T								S											.	.	.	.	T	T	T										T	T																	T
Template Predicted Secondary structure																					.	.	.	.																							.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																										.	.	.																																	.	.	.	.	.	.	.
Query SS confidence																										.	.	.																																	.	.	.	.	.	.	.
Query Sequence		E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	.	.	.	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q	.	.	.	.	.	.	.	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y
Query Conservation																										.	.	.																																	.	.	.	.	.	.	.
Alig confidence																										.	.	.																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	I	K	Q	V	K	F	I	Y	V	V	S	N	F	H	N	P	A	G	V	T	T	S	L	E	K	R	K	A	L	V	E	I	A	E	K	Y	D	L	F	I	V	E	D	D	P	Y	G	A	L	R	Y	E	G	E	T	V	D	P	I	F	K	I	G	G	P	E	R	V	V	L	L	N	T	F	S	K	V	L
Template Known Secondary structure		T		G	G	G									S	S		T	T	T																			T	T								S	S	T	T		B		S	S												T	T	T							S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		225	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		G	P	T	G	.	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S
Query Conservation						.
Alig confidence						.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	G	L	R	I	G	X	V	A	G	S	K	E	F	I	R	K	I	V	Q	A	K	Q	S	A	D	L	C	S	P	A	I	T	H	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	R	Y	L	E	R	Y	D	L	L	E	Q	L	K	P	T	I	E	L	Y	R	R	K	R	T	V
Template Known Secondary structure			G	G	G																								S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S						T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.																	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	.	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K
Query Conservation																																	.
Alig confidence																																	.																												.	.	.	.														.
Template Conservation																																																													.	.	.	.														.
Template Sequence		X	L	N	A	L	E	E	Y	F	S	D	I	P	G	V	K	W	V	K	S	E	G	G	L	F	I	W	L	T	L	P	E	G	F	D	T	W	E	X	F	E	Y	A	K	R	K	K	V	F	Y	V	P	G	R	V	F	K	V	Y	.	.	.	.	D	E	P	S	P	S	X	R	L	S	F	C	L	.	P	P	D
Template Known Secondary structure										S	T	T	S	T	T							S	B	S	S								T	T			T	T	T	T								T						G	G	G	G		T	T	.	.	.	.					S							S	S	.	S
Template Predicted Secondary structure																																																													.	.	.	.														.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.					.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	I	V	E	G	I	K	R	L	R	E	V	V	L	E	Y	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions