Return to main results Retrieve Phyre Job Id

Job DescriptionQ46925
Confidence99.93%DateThu Jan 5 12:35:54 GMT 2012
Rank145Aligned Residues345
% Identity16%Templated1sffa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20....... ..30.........40.........50.........60.........70.........80.........90
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Query Sequence  QDAGVYLDSAA. . . . . . TALKPEAVVEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGT
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Template Sequence  VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLA. . . . . . YEPYLELCEIMNQKVPGDFAKKTLLVTTG
Template Known Secondary structure  TT

SST
TT
BT
TTT
S


TTTS
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SS
SS
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   38.40.........50.........60.........70.........80.. .......90.........100.........110.
 
   91........100.........110.........120.........130 .........140.........150.......
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Query Sequence  TESINMVAQCYARPRLQPGDEIIVSVAEHHANLVPWLMVA. . . . . . . . . . . . QQTGAKVVKLPLNAQRLPDVDLLPELI.
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Template Sequence  SEAVENAVKIARAATKR. . SGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHR
Template Known Secondary structure  T
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TT



SSSS

TTTTTTS



SS


BGGGTB
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   112.......120........ .130.........140.........150.........160.........170.........180.........
 
   158.160.........170........ .180.........190.........200....... ..210.........220.
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Query Sequence  . . . . . . . TPRSRILALGQMSNVTGGCPD. . . . LARAITFAHSAGMVVMVDGAQGAVHFPAD. . . . . VQQLDIDFYAFSGH
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Template Sequence  IFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKS
Template Known Secondary structure  T

GGG
SB
TTTTS
B

T

TTTTTTTTSSSSGGGGTTS

S
GG
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   190.........200.........210.........220.........230.........240.........250.........260.........
 
   222.......230.........240.........250.........260.........270.........280.........290.........300.
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Query Sequence  KLYGPTGIGVLYGKSELLEAMSPWLGGGKMVHEVSFDGFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADYDINQAESWS
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Template Sequence  IAGGFP. LAGVTGRAEVMDAVAPGGLGG. . . . . . . . . . . . . . . . . . . . TYAGNPIACVAALEVLKVFEQENLLQKANDLG
Template Known Secondary structure  GGTSS
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TTS
TTSS

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TT
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   270..... ....280.........290...... ...300.........310.........320........
 
   302.......310.........320.........330....... ..340.........350.........360.........370..
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Query Sequence  RSLATLAEDALAKRPGFRSFRCQDSSLLAFDFAGVH. . . . . . . . . HSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTL
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Template Sequence  QKLKDGLLAIAEKHPEIGDVRGLGA. MIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP. . . . . . . . . . YYNVL
Template Known Secondary structure  T
TTTT.BGGG
TTSB
TT
ST..........TS
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   329330.........340.........350... ......360.........370.........380.........390.. .....
 
   373......380.........390.........400.
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Query Sequence  RASFAPYNTKSDVDALVNAVDRALELLVD
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Template Sequence  RILVPLTIEDAQIRQGLEIISQCFDEAKQ
Template Known Secondary structure 


TT



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   398.400.........410.........420......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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