Job Description Q46925 Confidence 99.87% Date Thu Jan 5 12:35:54 GMT 2012 Rank 202 Aligned Residues 357 % Identity 16% Template d1rv3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																									.	.																																										.	.
Query SS confidence																									.	.																																										.	.
Query Sequence		S	A	A	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	.	.	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	.	.	G	T	T	E	S	I	N	M	V	A	Q	C
Query Conservation																									.	.																																										.	.
Alig confidence																									.	.																																										.	.
Template Conservation
Template Sequence		I	A	S	E	N	F	A	S	R	A	V	L	E	A	L	G	S	C	L	N	N	K	Y	S	L	G	Y	P	G	Q	R	Y	Y	G	G	T	E	H	I	D	E	L	E	T	L	C	Q	K	R	A	L	Q	A	Y	G	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A
Template Known Secondary structure			T	T													T	S	G	G	G	T							T	T			S	S	S																				T	T			T	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																		.
Query SS confidence																												.	.	.	.	.	.																		.
Query Sequence		Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	.	.	.	.	.	.	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	.	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T
Query Conservation																												.	.	.	.	.	.																		.
Alig confidence			.	.	.	.																						.	.	.	.	.	.																		.
Template Conservation			.	.	.	.
Template Sequence		L	.	.	.	.	V	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	M	A	Y	K	V	N	P	D	T	G	Y	I	D	Y	D	R	L	E	E	N	A	R	L	F	H	P	K	L	I	I	A	G	T	S	C	Y	S
Template Known Secondary structure			.	.	.	.	T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B															S							S	S
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		131					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	.	.	.	P	A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K
Query Conservation																																	.	.	.
Alig confidence		.																															.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	R	N	L	D	Y	G	R	L	R	K	I	A	D	E	N	G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	V	A	G	V	V	P	S	P	F	E	H	C	H	V	V	T	T	T	T	H	K	T	L	R	G	C	R	A	G	M	I	F	Y	R	R	G	.	.	.	.	.	.	.	.	.	.	.	.	V
Template Known Secondary structure		.	S														T	T								T	T	T							T	S	S			G	G	G	T		S						S	S	G	G	G				S									S	.	.	.	.	.	.	.	.	.	.	.	.	B
Template Predicted Secondary structure		.																																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.													.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	S	S	L	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	P	E	F	K	E	Y	Q	R	Q	V	V	A	N	C	R	A	L	S	A	A	L	V	E	L	G	Y	K	I	V	T	G	G	S	D	N	H	L	I	L
Template Known Secondary structure						B												T	T	T	T			S																	T	S																								T	T				G	G	G	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		331	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.					.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure						.	.																																												.	.	.	.
Query SS confidence						.	.																																												.	.	.	.
Query Sequence		F	D	F	A	.	.	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	.	.	.	.	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L	L	V	D
Query Conservation						.	.																																												.	.	.	.
Alig confidence						.	.																											.	.	.															.	.	.	.
Template Conservation																																		.	.	.
Template Sequence		V	D	L	R	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	.	.	.	K	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D	F	Q	K	V	A	H	F	I	H	R	G	I	E	L	T	V	Q
Template Known Secondary structure				G	G	G	G	T													T	T									S	S		.	.	.	S		T	T	S														T	T
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.				.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions