Job Description Q46925 Confidence 99.95% Date Thu Jan 5 12:35:54 GMT 2012 Rank 108 Aligned Residues 331 % Identity 14% Template d1o69a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.84

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.																			.	.	.																					.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.																			.	.	.																					.	.	.
Template Sequence		L	K	Y	I	E	E	V	F	K	S	N	Y	I	A	P	.	.	.	.	.	.	.	.	.	.	L	G	E	F	V	N	R	F	E	Q	S	V	K	D	Y	S	K	S	.	.	.	E	N	A	L	A	L	N	S	A	T	A	A	L	H	L	A	L	R	V	A	.	.	.	G	V	K	Q	D	D	I	V	L	A	S
Template Known Secondary structure												T	T	T	S		.	.	.	.	.	.	.	.	.	.	T	T																	.	.	.	S						S													T	.	.	.	T			T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																			.	.	.																					.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.											30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		S	F	T	F	I	A	S	V	A	P	I	C	.	.	.	.	Y	L	K	A	K	P	V	F	I	D	C	D	E	T	Y	N	I	D	V	D	L	L	K	L	A	I	K	E	C	E	K	K	P	K	A	L	I	L	T	H	L	Y	G	N	A	A	K	M	D	E	I	V	E	I	C	K	E	N	D	I	V	L	I	E
Template Known Secondary structure		S	S	S		G	G	G	T					.	.	.	.		T	T								B		T	T	S	S	B													S	S										G	G	G															T	T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q	L	.	.	.	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G
Query Conservation																		.	.	.
Alig confidence																		.	.	.																																																							.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		D	A	A	E	A	L	G	S	F	Y	K	N	K	A	L	G	T	F	G	E	F	G	V	Y	S	Y	N	G	N	K	I	I	T	T	S	G	G	G	M	L	I	G	K	N	K	E	K	I	E	K	A	R	F	Y	S	T	Q	A	R	E	N	C	L	H	Y	E	H	L	D	Y	G	Y	N	.	.	.	.	.	.	.
Template Known Secondary structure				T	T		T	T				T	T			T	T	S	S	S	S								T	T	S	S	S			S	S							S												T	B	T				S	S	S	S				S	S				B	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	S	S	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	Y	R	L	S	N	V	L	G	A	I	G	V	A	Q	M	E	V	L	E	Q	R	V	L	K	K	R	E	I	Y	E	W	Y	K	E	F	L	G	E	Y	F	S	F	L	D	E	L	E	N	S	R	S	N	R	W	L	S	T	A	L	I	N	F	D	K	N	E	L	N	A	C	Q	K	D	I	N	I
Template Known Secondary structure		.	.	.	.		B														T	T																				T	T	T								T	T						S	S						S			G	G	G	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
					331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.													.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure		.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	F	D	F	A	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	.	.	.	.	.	.	.	.	.	.	.	.	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A
Query Conservation		.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Q	K	N	I	T	L	H	P	K	I	S	K	L	I	E	D	L	K	N	K	Q	I	E	T	R	P	L	W	K	A	M	H	T	Q	E	V	F	K	G	A	K	A	Y	L	N	G	N	S	E	L	F	F	Q	K	G	I	C	L	P	S	G	T	A	M	S	K	D	D	V	Y	E	I	S	K	L	I	L	K	S
Template Known Secondary structure																						T	T				B						G	G	G		G	G	G	T	T							S																T	T
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		396	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		384	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions