Job Description Q46925 Confidence 99.97% Date Thu Jan 5 12:35:54 GMT 2012 Rank 57 Aligned Residues 365 % Identity 19% Template d1kl1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.93

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.																																									.	.
Query SS confidence					.	.	.																																									.	.
Query Sequence		N	P	A	.	.	.	Q	F	R	A	Q	F	P	A	L	Q	D	A	G	V	Y	L	D	S	A	A	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	.	.	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P
Query Conservation					.	.	.																																									.	.
Alig confidence					.	.	.									.								.																								.	.																																.
Template Conservation																.								.																																																									.
Template Sequence		D	P	Q	V	F	A	A	I	E	Q	E	R	K	R	.	Q	H	A	K	I	E	L	.	I	A	S	E	N	F	V	S	R	A	V	M	E	A	Q	G	S	V	L	T	N	K	Y	A	E	G	Y	P	G	R	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	E	L	A	R	E	R	A	K	Q	L	F	G	A	.
Template Known Secondary structure																.				S				.		T	T													T	S	G	G	G	G							T	T			S	S	S																							.
Template Predicted Secondary structure																.								.																																																									.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	.	.	.	R	L	P	D	V	D	L	L	P	E	L
Query Conservation																																																																				.	.	.
Alig confidence		.																						.	.	.	.																						.																			.	.	.
Template Conservation		.																						.	.	.	.																						.
Template Sequence		.	E	H	A	N	V	Q	P	H	S	G	A	Q	A	N	M	A	V	Y	F	T	V	.	.	.	.	L	E	H	G	D	T	V	L	G	M	N	L	S	H	G	G	H	L	T	H	G	.	S	P	V	N	F	S	G	V	Q	Y	N	F	V	A	Y	G	V	D	P	E	T	H	V	I	D	Y	D	D	V	R	E	K
Template Known Secondary structure		.	S							S	S													.	.	.	.			T	T								G	G	G	T			G	G	G	T	.		T	T	S						S							B		T	T	T		S	B
Template Predicted Secondary structure		.																						.	.	.	.																						.
Template SS confidence
			85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	.	.	.	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L	Y
Query Conservation																																																						.	.	.
Alig confidence								.																																														.	.	.
Template Conservation								.
Template Sequence		A	R	L	H	R	P	.	K	L	I	V	A	A	A	S	A	Y	P	R	I	I	D	F	A	K	F	R	E	I	A	D	E	V	G	A	Y	L	M	V	D	M	A	H	I	A	G	L	V	A	A	G	L	H	P	N	P	V	P	Y	A	H	F	V	T	T	T	T	H	K	T	L	R	G	P	R	G	G	M	I	L
Template Known Secondary structure								.	S							S	S			S															T								T	T	T						T	T	S	S			S	T	T	T		S						S	S	S	T	T				S
Template Predicted Secondary structure								.
Template SS confidence
		159	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	Q	E	Q	F	A	K	Q	I	D	K	A	I	F	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	G	G	P	L	M	H	V	I	A	A	K	A	V	A	F	G	E	A	L	Q	D	D	F	K	A	Y	A	K	R	V	V	D	N	A	K	R	L	A	S	A	L	Q
Template Known Secondary structure															T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S	S																		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.																					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.					.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																																												.	.	.	.
Query SS confidence																							.	.																																												.	.	.	.
Query Sequence		K	R	P	G	F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	.	.	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	.	.	.	.	P	Y	N	T	K	S	D	V	D	A
Query Conservation																							.	.																																												.	.	.	.
Alig confidence																							.	.																																.	.											.	.	.	.
Template Conservation																																																								.	.
Template Sequence		N	E	G	F	T	L	V	S	G	G	T	D	N	H	L	L	L	V	D	L	R	P	Q	Q	L	T	G	K	T	A	E	K	V	L	D	E	V	G	I	T	V	N	K	N	T	I	P	Y	D	P	E	S	P	F	.	.	V	T	S	G	I	R	I	G	T	A	A	V	T	T	R	G	F	G	L	E	E	M	D	E
Template Known Secondary structure			T	T				G	G	G	S		S	S	S							G	G	G	T														T									T	T		S	S		T	T	.	.	T		S												T	T
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	A	V	D	R	A	L	E	L	L	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	A	I	I	G	L	V	L	K	N	V	G	S
Template Known Secondary structure											T		T	T
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions