Job Description Q46925 Confidence 99.82% Date Thu Jan 5 12:35:54 GMT 2012 Rank 223 Aligned Residues 361 % Identity 14% Template d1ejia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.90

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																																									.	.	.	.
Query SS confidence																										.	.																																									.	.	.	.
Query Sequence		S	A	A	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	.	.	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	.	.	.	.	G	T	T	E	S	I	N	M	V	A
Query Conservation																										.	.																																									.	.	.	.
Alig confidence																										.	.																																			.	.					.	.	.	.
Template Conservation																																																														.	.
Template Sequence		I	A	S	E	N	F	A	S	R	A	V	L	E	A	L	G	S	S	L	N	N	K	Y	S	E	G	Y	P	G	Q	R	Y	Y	G	G	T	E	F	I	D	E	L	E	X	L	C	Q	K	R	A	L	Q	A	Y	H	L	D	P	Q	C	.	.	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y
Template Known Secondary structure			T	T													T	S	G	G	G	G					S		S	S	S		S	S	S																				T	T			T	T	T	.	.								S	S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																														.	.	.	.	.	.																		.
Query SS confidence																														.	.	.	.	.	.																		.
Query Sequence		Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	.	.	.	.	.	.	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	.	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N
Query Conservation																														.	.	.	.	.	.																		.
Alig confidence					.	.	.	.																						.	.	.	.	.	.																		.																											.
Template Conservation					.	.	.	.																																																																								.
Template Sequence		T	A	L	.	.	.	.	V	E	P	H	G	R	I	X	G	L	D	L	P	D	G	G	H	L	T	H	G	F	X	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	X	P	Y	K	V	Y	P	E	T	G	Y	I	N	Y	D	Q	L	E	E	N	A	S	L	F	H	P	K	L	I	I	A	G	T	.	S
Template Known Secondary structure					.	.	.	.	T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B															S							.	S
Template Predicted Secondary structure					.	.	.	.																																																																								.
Template SS confidence
		129	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q	L	.	.	.	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G
Query Conservation																																										.	.	.
Alig confidence																																										.	.	.																																		.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		C	Y	S	R	N	L	D	Y	A	R	L	R	K	I	A	D	D	N	G	A	Y	L	X	A	D	X	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	E	H	C	H	V	V	T	T	T	T	H	K	T	L	R	G	C	R	A	G	X	I	F	Y	R	K	G	V	R	S	V	D	P	K	.	.	.	.
Template Known Secondary structure		S			S														T	T								G	G	G						T	T	S	S			G	G	G	T		S						S	S	G	G	G				S															S	T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	.	D	S	S
Query Conservation																																																																														.
Alig confidence		.																																																																			.									.
Template Conservation		.																																																																			.
Template Sequence		.	T	G	K	E	T	Y	Y	E	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	X	T	T	E	F	K	I	Y	Q	L	Q	V	L	A	N	C	R	A	L	S	D	A	L	T	E	L	.	G	Y	K	I	V	T	G	G	S	D	N	H
Template Known Secondary structure		.	T																	T	T	T	T			S																	T	S																								T	.	T			B	T	T	S	S		S	S	S
Template Predicted Secondary structure		.																																																																			.
Template SS confidence
			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.
		328	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.					.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure									.	.																																																	.	.	.	.
Query SS confidence									.	.																																																	.	.	.	.
Query Sequence		L	L	A	F	D	F	A	.	.	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	.	.	.	.	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L	L	V	D
Query Conservation									.	.																																																	.	.	.	.
Alig confidence									.	.																											.	.	.																				.	.	.	.
Template Conservation																																					.	.	.
Template Sequence		L	I	L	X	D	L	R	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	.	.	.	K	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	E	D	F	Q	K	V	A	H	F	I	H	R	G	I	E	L	T	L	Q
Template Known Secondary structure							G	G	G	G	T													T	T				B					S	S	S	.	.	.	S		T	T	S		S											T	T	T
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.				.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions