Job Description Q46925 Confidence 99.92% Date Thu Jan 5 12:35:54 GMT 2012 Rank 149 Aligned Residues 331 % Identity 17% Template d1e5ea_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.18

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	A	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P
Query Conservation
Alig confidence																								.	.	.	.	.	.																											.	.	.																					.	.	.
Template Conservation																								.	.	.	.	.	.																											.	.	.																					.	.	.
Template Sequence		Y	Q	T	S	T	F	V	F	D	N	C	Q	Q	G	G	N	R	F	A	G	Q	E	.	.	.	.	.	.	S	G	Y	I	Y	T	R	L	G	N	P	T	V	S	N	L	E	G	K	I	A	F	L	E	K	T	.	.	.	E	A	C	V	A	T	S	S	G	M	G	A	I	A	A	T	V	L	T	I	.	.	.
Template Known Secondary structure					S	B				S	S									T	T	S	S	.	.	.	.	.	.		S			B	T	T	T																	T		.	.	.	S						S	S													.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.																											.	.	.																					.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	R	A	I	T
Query Conservation
Alig confidence		.																																							.	.	.	.	.
Template Conservation		.																																							.	.	.	.	.
Template Sequence		.	L	K	A	G	D	H	L	I	S	D	E	C	L	Y	G	C	T	H	A	L	F	E	H	A	L	T	K	F	G	I	Q	V	D	F	I	N	T	A	.	.	.	.	.	I	P	G	E	V	K	K	H	M	K	P	N	T	K	I	V	Y	F	E	T	P	A	N	P	T	L	K	I	I	D	M	E	R	V	C	K
Template Known Secondary structure		.			T	T							S												T					T	T								T	T	.	.	.	.	.	S	T	T								T	T								S	S		T	T	T
Template Predicted Secondary structure		.																																							.	.	.	.	.
Template SS confidence
			98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	.	.	.	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.																													.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		D	A	H	S	Q	E	G	V	L	V	I	A	D	N	T	F	C	S	P	M	I	T	N	P	V	D	F	G	V	D	V	V	V	H	S	A	T	K	Y	I	N	G	H	T	D	V	V	A	G	L	I	C	G	K	A	D	L	L	Q	Q	I	R	M	V	G	I	K	D	I	T	G	S	V	I	S	P	.	.	.	.
Template Known Secondary structure					T	S	T	T								T	T	T		T	T	T			G	G	G	G	T		S						T	T	T	T	T	T		S	S																				T													.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.																		.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	C	Q
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	A	W	L	I	T	R	G	L	S	T	L	N	I	R	M	K	A	E	S	E	N	A	M	K	V	A	E	Y	L	K	S	H	P	A	V	E	K	V	Y	Y	P	G	F	E	D	H	E	G	H	D	I	A	K	K	Q	M	R	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T																					T		T	T							T	T		S	S	S	T	T									S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.																.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	S	L	L	A	F	D	F	A	G	.	.	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A
Query Conservation													.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	S	M	I	T	F	I	L	K	S	G	F	E	G	A	K	K	L	L	D	N	L	K	L	I	T	L	A	V	S	L	G	G	C	E	S	L	I	Q	H	P	A	S	M	T	H	A	V	V	P	K	E	E	R	E	A	A	G	I	T	D	G	M	I	R	L	S	V	G	I	E	D	A	D	E	L	I	A	D
Template Known Secondary structure				S							T	T											T		S	S	S			S	S				S	S	S						G	G	G	T	T	T	T	T	S								T	T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	A	V	D	R	A	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	Q	G	L	D	A	L	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions