Job Description Q46925 Confidence 99.96% Date Thu Jan 5 12:35:54 GMT 2012 Rank 58 Aligned Residues 341 % Identity 15% Template d1bw0a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.50

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		17	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.												.	.	80
Predicted Secondary structure									.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	D	A	G	V	Y	L	.	.	.	.	.	D	S	A	A	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	.	.	.	.	.	.	.	.	.	.	.	A	P	D
Query Conservation									.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																																					.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.
Template Sequence		P	K	P	I	I	K	L	S	V	G	D	P	T	L	D	K	N	L	L	T	S	A	A	Q	I	K	K	L	K	E	A	I	D	S	Q	E	C	N	G	Y	F	P	T	V	G	S	P	E	.	.	.	.	.	.	.	.	A	R	E	A	V	A	T	W	W	R	N	S	F	V	H	K	E	E	L	K	S	T	I	V
Template Known Secondary structure			S										T	T	T	T	S		S																T	T		S	S	S				T	T					.	.	.	.	.	.	.	.																S	T	T	T	G	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.									80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	.	.	L	P	D	V	D	L	L	P	E	L	I	T
Query Conservation																																																																				.	.
Alig confidence																							.	.	.	.																							.	.	.	.																.	.
Template Conservation																							.	.	.	.																							.	.	.	.
Template Sequence		K	D	N	V	V	L	C	S	G	G	S	H	G	I	L	M	A	I	T	A	I	.	.	.	.	C	D	A	G	D	Y	A	L	V	P	Q	P	G	F	P	H	Y	E	T	V	C	K	.	.	.	.	A	Y	G	I	G	M	H	F	Y	N	C	R	P	E	N	D	W	E	A	D	L	D	E	I	R	R	L	K	D
Template Known Secondary structure		G	G	G					S														.	.	.	.			T	T								S			T								.	.	.	.		T	T										G	G	G	T	T
Template Predicted Secondary structure																							.	.	.	.																							.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																						.	.	.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	.	.	.	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	.	.	.	.	.	.	.	.	.	.	F	P	A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G
Query Conservation																						.	.	.																										.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	T	K	L	L	I	V	T	N	P	S	N	P	C	G	S	N	F	S	R	K	H	V	E	D	I	V	R	L	A	E	E	L	R	L	P	L	F	S	D	E	I	Y	A	G	M	V	F	K	G	K	D	P	N	A	T	F	T	S	V	A	D	F	E	T	T	V	P	R	V	I	L	G	G	T	A	N	L	V
Template Known Secondary structure		T	T								S	S		T	T	T																				T								T	T	T	T		B			S	S		T	T						T	T	S	S			S													S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		226	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		P	T	G	.	.	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S
Query Conservation					.	.
Alig confidence					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	G	W	R	L	G	W	L	L	Y	V	D	P	H	G	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	F	L	E	G	L	K	R	V	G	M	L	V	C	G	P	C	T	V	V	Q	A	A	L	G	E	A	L	L	N	T	P	Q	E	H	L	D	Q	I	V	A	K	I	E	E
Template Known Secondary structure			G	G	G										T	T		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T		S														S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.																	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.							.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.												.
Query SS confidence																																	.	.	.	.	.	.												.
Query Sequence		L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	.	.	.	.	.	.	G	V	H	H	S	D	M	V	T	L	L	.	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F
Query Conservation																																	.	.	.	.	.	.												.
Alig confidence																																	.	.	.	.	.	.												.														.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.
Template Sequence		S	A	M	Y	L	Y	N	H	I	G	E	C	I	G	L	A	P	T	M	P	R	G	A	M	Y	L	M	S	R	I	D	L	E	K	Y	R	D	I	K	T	D	V	E	F	F	E	K	L	L	E	E	E	N	V	Q	V	L	P	G	T	I	F	.	.	.	.	.	.	.	.	H	A	P	G	F	T	R	L	T	T
Template Known Secondary structure											T	T	S	T	T								B	T	T								G	G	G	B	S	S			S																			G	G	G	G	.	.	.	.	.	.	.	.	T		T	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.									.	.	.	.	.	.	.	390	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L	L
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		T	.	.	R	P	V	E	V	Y	R	E	A	V	E	R	I	K	A	F	C	Q	R	H
Template Known Secondary structure			.	.	S
Template Predicted Secondary structure			.	.
Template SS confidence
		393			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions