Job Description Q46925 Confidence 99.96% Date Thu Jan 5 12:35:54 GMT 2012 Rank 78 Aligned Residues 344 % Identity 15% Template d1b9ha_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.00

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	A	A	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R
Query Conservation
Alig confidence																							.	.										.	.	.	.	.	.	.																	.	.	.																						.
Template Conservation																							.	.										.	.	.	.	.	.	.																	.	.	.																						.
Template Sequence		E	F	P	A	W	P	Q	Y	D	D	A	E	R	N	G	L	V	R	A	L	E	.	.	Q	G	Q	W	W	R	M	G	G	.	.	.	.	.	.	.	D	E	V	N	S	F	E	R	E	F	A	A	H	H	G	A	.	.	.	A	H	A	L	A	V	T	N	G	T	H	A	L	E	L	A	L	Q	V	M	G	.
Template Known Secondary structure						S	S																.	.	T	S			B	T	T	T		.	.	.	.	.	.	.	S													T	T		.	.	.	S						S													T	T	.
Template Predicted Secondary structure																							.	.										.	.	.	.	.	.	.																	.	.	.																						.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	.	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	R	A
Query Conservation																																											.
Alig confidence		.	.																							.	.	.	.														.																		.	.	.
Template Conservation		.	.																							.	.	.	.																																.	.	.
Template Sequence		.	.	V	G	P	G	T	E	V	I	V	P	A	F	T	F	I	S	S	S	Q	A	A	Q	.	.	.	.	R	L	G	A	V	T	V	P	V	D	V	D	A	A	T	Y	N	L	D	P	E	A	V	A	A	A	V	T	P	R	T	.	.	.	K	V	I	M	P	V	H	M	A	G	L	M	A	D	M	D	A	L
Template Known Secondary structure		.	.			T	T							S	S	S		T								.	.	.	.		T	T								B		T	T	T			B											T	T		.	.	.						B		G	G	G
Template Predicted Secondary structure		.	.																							.	.	.	.																																.	.	.
Template SS confidence
				75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																																.
Query SS confidence																								.	.	.																																.
Query Sequence		I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	.	.	.	P	A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L	Y	G	K	.	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D
Query Conservation																								.	.	.																																.
Alig confidence																								.	.	.																																.																							.
Template Conservation																																																																																	.
Template Sequence		A	K	I	S	A	D	T	G	V	P	L	L	Q	D	A	A	H	A	H	G	A	R	W	Q	G	K	R	V	G	E	L	D	S	I	A	T	F	S	F	Q	N	G	K	L	M	T	A	G	E	G	G	A	V	V	F	P	D	G	E	T	E	K	Y	E	T	A	F	L	R	H	S	C	G	R	P	R	D	D	R	.
Template Known Secondary structure									T			B					T	T		T	T				T	T			G	G	G	S	S	S								T	T	S	S	S		S	S	S								T	T												T	B	T	T			T	T		S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.							.	.	.	.	330	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.
Query Sequence		G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	.	.	.	.	.	.	S	S	L	L	A	F	D
Query Conservation																																																																					.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	R	Y	F	H	K	I	A	G	S	N	M	R	L	N	E	F	S	A	S	V	L	R	A	Q	L	A	R	L	D	E	Q	I	A	V	R	D	E	R	W	T	L	L	S	R	L	L	G	A	I	D	G	V	V	P	Q	G	G	D	V	R	A	D	R	N	S	H	Y	M	A	M	F	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	S					S				B		B		B												T	T																					T	S	T	T								T	T			B				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		333	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.																						.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		F	A	G	V	H	H	S	.	.	.	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	.	N	T	K	S	D	V	D	A
Query Conservation									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		I	P	G	L	T	E	E	R	R	N	A	L	V	D	R	L	V	E	A	G	L	P	A	F	A	A	F	R	A	I	Y	R	T	D	A	F	W	E	L	G	A	P	D	E	S	V	D	A	I	A	R	R	C	P	N	T	D	A	I	S	S	D	C	V	W	L	H	H	R	V	L	L	A	G	E	P	E	L	H	A
Template Known Secondary structure			T	T																T	T										G	G	G	S						S	S			S	S								T																G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	A	V	D	R	A	L	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	E	I	I	A	D	A	V	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions