Job Description Q46925 Confidence 99.90% Date Thu Jan 5 12:35:54 GMT 2012 Rank 181 Aligned Residues 342 % Identity 14% Template c3t18D_ PDB info PDB header:transferase Chain: D: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of aminotransferase from anaerococcus prevotii dsm2 20548. Resolution 2.86 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	D	S	A	A	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y
Query Conservation
Alig confidence																											.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		L	L	D	D	K	G	K	I	I	A	L	P	S	V	Y	D	R	L	D	E	X	D	R	S	H	.	.	.	.	.	I	A	S	Y	A	P	I	E	G	E	K	D	Y	R	K	I	V	I	D	T	L	F	G	P	Y	K	P	E	G	Y	I	S	A	I	A	T	P	G	G	T	G	A	I	R	S	A	I	F	S	Y
Template Known Secondary structure			B		T	T	S		B												T	S		G	G	G	.	.	.	.	.	T	S	S				T	T															G	G	G			S	S								S													T
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.																						.	.
Query SS confidence																																																.	.	.	.	.																						.	.
Query Sequence		A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	.	.	.	.	.	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	.	.	M	S	N	V	T	G
Query Conservation																																																.	.	.	.	.																						.	.
Alig confidence		.	.	.	.																							.	.	.	.																	.	.	.	.	.																						.	.
Template Conservation		.	.	.	.																							.	.	.	.
Template Sequence		.	.	.	.	L	D	E	G	D	P	L	I	C	H	D	Y	Y	W	A	P	Y	R	K	I	C	E	.	.	.	.	E	F	G	R	N	F	K	T	F	E	F	F	T	D	D	F	A	F	N	I	D	V	Y	K	E	A	I	D	E	G	I	R	D	S	D	R	I	A	S	L	I	N	S	P	G	N	N	P	T	G
Template Known Secondary structure		.	.	.	.	S		S	S							S	S			T								.	.	.	.			T									B		S	S	S	S	B															S		S									S	S		T	T	T
Template Predicted Secondary structure		.	.	.	.																							.	.	.	.
Template SS confidence
						119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.										190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	P	D	L	A	R	A	I	T	F	A	H	S	A	.	.	.	.	.	.	.	.	.	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W
Query Conservation																	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		Y	S	L	S	D	E	E	W	D	E	V	I	T	F	L	K	E	K	A	E	D	K	D	K	K	I	T	L	I	V	D	V	A	Y	L	E	F	A	G	D	G	D	Q	Q	R	K	F	.	.	.	.	.	F	E	K	F	S	N	L	P	R	N	L	F	V	V	V	A	F	S	X	S	K	S	H	T	A	Y	G	L
Template Known Secondary structure														T	T	T	T	T	T	T	T	S	T	T										T	T		T	T	S	S	S	S	S	S	S	S	T	T	.	.	.	.	.	T	G	G	G	S	S			T	T														T		G	G	G
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.						.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.																												.	.	.
Query SS confidence																							.	.	.	.	.																												.	.	.
Query Sequence		L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	.	.	.	.	.	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	.	.	.	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G
Query Conservation																							.	.	.	.	.																												.	.	.
Alig confidence																							.	.	.	.	.																												.	.	.																							.
Template Conservation																																																																																.
Template Sequence		R	S	G	A	A	V	G	I	S	S	S	K	E	I	I	E	E	F	E	A	S	L	A	H	S	A	R	C	N	W	S	N	G	T	H	A	A	Q	N	I	L	I	E	L	E	R	A	E	N	K	K	I	Y	E	Q	E	L	V	D	L	R	N	X	L	K	S	R	A	D	V	F	V	T	A	A	K	E	N	.	K
Template Known Secondary structure											S																				T	S	S							T	T	T	S	S	T	T	S	G	G	G	T	T																												.	T
Template Predicted Secondary structure																																																																																.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E
Query Conservation
Alig confidence																			.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																			.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		L	T	X	I	P	Y	F	G	G	F	F	T	F	I	P	T	D	.	.	K	A	F	D	I	V	K	D	L	E	K	E	N	I	F	T	I	P	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	I	R	V	A	I	C	.	G	V	G	E	E	K	I	P	K	L	V	Q	R	L	A	F	Y	T	N
Template Known Secondary structure									S	S	S							S	.	.											T	T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	S						S	T	.	T	S		T	T	T
Template Predicted Secondary structure																			.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.														.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		398
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		409

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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