Job Description Q46925 Confidence 99.97% Date Thu Jan 5 12:35:54 GMT 2012 Rank 42 Aligned Residues 324 % Identity 15% Template c3ly1C_ PDB info PDB header:transferase Chain: C: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (yp_050345.1) from erwinia carotovora atroseptica scri1043 at 1.80 a3 resolution Resolution 1.80 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		P	A	L	Q	D	A	G	V	Y	L	D	S	A	A	T	A	L	.	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E
Query Conservation																			.
Alig confidence				.															.																					.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation				.																																				.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		P	S	.	T	D	N	P	I	R	I	N	F	N	E	N	P	L	G	X	S	P	K	A	Q	A	A	A	R	D	A	V	V	K	A	N	R	Y	A	.	.	.	.	.	.	.	.	.	.	.	K	N	E	I	L	X	L	G	N	K	L	A	A	H	H	Q	V	.	E	A	P	S	I	L	L	T	A	G	S	S	E
Template Known Secondary structure				.	S	S	S					S	S				S	S														G	G	G	T	T	S			.	.	.	.	.	.	.	.	.	.	.															T	T	S	.		G	G	G					S
Template Predicted Secondary structure				.																																				.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		53	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.												90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	.	.	R	I	L	A	L	G	Q	M	S
Query Conservation																																																																							.	.
Alig confidence											.	.	.	.																							.	.	.	.																															.	.
Template Conservation											.	.	.	.																							.	.	.	.
Template Sequence		G	I	R	A	A	I	E	A	Y	.	.	.	.	A	S	L	E	A	Q	L	V	I	P	E	L	T	Y	G	D	G	E	H	F	A	K	.	.	.	.	I	A	G	X	K	V	T	K	V	K	X	L	D	N	W	A	F	D	I	E	G	L	K	A	A	V	A	A	Y	S	G	P	S	I	V	Y	L	V	N	P	N
Template Known Secondary structure											.	.	.	.			T	T							S	S	S		T								.	.	.	.		T	T										T	T	S													T			S								S	S
Template Predicted Secondary structure											.	.	.	.																							.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.																					.	.	.	.	.	.	.	.																						.	.
Query SS confidence																			.	.																					.	.	.	.	.	.	.	.																						.	.
Query Sequence		N	V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	.	.	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	.	.	.	.	.	.	.	.	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	.	.	I	G	V	L	Y	G	K	S	E	L
Query Conservation																			.	.																					.	.	.	.	.	.	.	.																						.	.
Alig confidence																			.	.																					.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		N	P	T	G	T	I	T	P	A	D	V	I	E	P	W	I	A	S	K	P	A	N	T	X	F	I	V	D	E	A	Y	A	E	F	V	N	D	P	R	F	R	S	I	S	P	X	I	T	Q	G	A	E	N	I	I	L	L	K	T	F	S	K	I	H	A	X	A	G	X	R	V	G	Y	A	V	A	H	P	T	V
Template Known Secondary structure		T	T	T															T			T	T								T	T	G	G	G				T	T				S						T	T		S	S							S	S	S	T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template Sequence		I	A	L	X	G	R	Y	V	A	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	N	F	S	G	V	D	A	A	L	A	S	X	N	D	S	A	F	I	T	Y	S	K	K	S	N	D	V	S	R	Q	I	L	L	K	A	L	E	D	L	.	K	L
Template Known Secondary structure							T	T	T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.																										.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L
Query Conservation
Alig confidence				.														.																								.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation				.														.																								.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		P	Y	.	L	P	S	E	G	N	F	V	F	H	Q	L	V	.	V	P	L	K	D	Y	Q	T	H	X	A	D	A	G	V	L	I	G	R	A	F	P	P	.	.	.	.	.	.	.	.	.	A	D	N	W	C	R	I	S	L	G	.	.	.	T	P	Q	E	X	Q	W	V	A	D	T	X	R	E	F	R	K	K
Template Known Secondary structure			B	.					S	S							S	.	S												T	T								T	T	.	.	.	.	.	.	.	.	.		T	T								.	.	.																		T
Template Predicted Secondary structure				.														.																								.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		326	.		.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.										.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions