Job Description Q46925 Confidence 99.83% Date Thu Jan 5 12:35:54 GMT 2012 Rank 221 Aligned Residues 324 % Identity 11% Template c3lwsF_ PDB info PDB header:lyase Chain: F: PDB Molecule:aromatic amino acid beta-eliminating PDBTitle: crystal structure of putative aromatic amino acid beta-2 eliminating lyase/threonine aldolase. (yp_001813866.1) from3 exiguobacterium sp. 255-15 at 2.00 a resolution Resolution 2.00 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D
Query Conservation
Alig confidence																																			.	.	.	.												.	.	.																						.	.	.
Template Conservation																																			.	.	.	.												.	.	.																						.	.	.
Template Sequence		H	G	K	R	N	V	G	V	L	K	T	A	F	A	A	V	A	D	E	X	A	S	D	Q	Y	G	T	G	A	I	I	E	P	.	.	.	.	F	E	Q	K	F	A	D	V	L	G	X	.	.	.	D	D	A	V	F	F	P	S	G	T	X	A	Q	Q	V	A	L	R	I	W	S	.	.	.	D	E	T	D	N
Template Known Secondary structure		S	S												T	T	S		T	T						T	T			T	T				.	.	.	.									T	T		.	.	.	S						S															.	.	.				T
Template Predicted Secondary structure																																			.	.	.	.												.	.	.																						.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	.	S	N	V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	A
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		R	T	V	A	Y	H	P	L	C	H	L	E	I	H	E	Q	D	G	L	K	E	L	H	P	I	E	T	I	L	V	G	A	A	D	R	L	X	T	L	D	E	I	K	A	L	P	D	I	A	C	L	L	L	E	L	P	Q	R	E	I	G	G	V	A	P	A	F	S	E	L	E	T	I	S	R	Y	C	R	E	R
Template Known Secondary structure								T	T						S	S	T	T						S	S							S		T	T	S												S		S						S	S	B	G	G	G	T	S	B
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q	L	.	.	.	.	.	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.																		.																													.	.	.	.	.	.	.
Template Conservation																																														.																													.	.	.	.	.	.	.
Template Sequence		G	I	R	L	H	L	D	G	A	R	L	F	E	X	L	P	Y	Y	E	K	T	A	A	E	I	A	G	L	F	D	S	I	Y	I	S	F	Y	G	L	G	G	I	A	G	.	A	I	L	A	G	P	A	A	F	C	Q	T	A	R	I	W	K	R	R	Y	G	G	D	L	I	S	L	Y	.	.	.	.	.	.	.
Template Known Secondary structure		T								T	T									T								T	T		S												S	S		.																					T				S				.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.																													.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.				.	.	.	340
Predicted Secondary structure																																																										.																	.	.	.
Query SS confidence																																																										.																	.	.	.
Query Sequence		A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	.	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	G	V	.	.	.	H	H	S	D
Query Conservation																																																										.																	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	I	V	S	A	D	Y	Y	Y	E	L	R	K	D	R	X	G	Q	Y	Y	E	Q	A	K	Q	L	A	E	Q	F	N	A	L	P	G	V	H	T	T	P	E	V	P	V	S	N	X	F	H	L	H	F	D	G	Q	A	A	D	I	S	P	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T																			S	T	T					S	S	S		S	S	S								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380				.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	.	.	.	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L
Query Conservation																																										.	.	.
Alig confidence																								.	.	.	.	.	.	.												.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		L	E	Q	V	Q	E	E	T	G	L	G	F	V	G	Y	L	V	D	K	D	G	Y	.	.	.	.	.	.	.	C	S	T	E	I	S	V	G	D	A	Y	G	E	L	D	Q	Q	T	R	D	A	G	F	A	R	L	R	Q	A	F
Template Known Secondary structure													S		S						S	S		.	.	.	.	.	.	.							B						T	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.								.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions