Job Description Q46925 Confidence 99.88% Date Thu Jan 5 12:35:54 GMT 2012 Rank 191 Aligned Residues 340 % Identity 17% Template c3l44A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase 1; PDBTitle: crystal structure of bacillus anthracis heml-1, glutamate semialdehyde2 aminotransferase Resolution 2.05 Å

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		17	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		Q	D	A	G	V	Y	L	D	S	A	A	.	.	.	.	.	.	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																			.	.									.	.	.	.	.	.	.																	.	.
Template Conservation																																					.	.									.	.	.	.	.	.	.																	.	.
Template Sequence		V	D	G	N	K	Y	I	D	Y	L	A	A	Y	G	P	I	I	T	G	H	A	H	P	H	I	T	K	A	I	T	T	A	A	E	N	.	.	G	V	L	Y	G	T	P	T	.	.	.	.	.	.	.	A	L	E	V	K	F	A	K	X	L	K	E	A	X	P	A	.	.	L	D	K	V	R	F	V	N	S	G
Template Known Secondary structure		T	T									G	G	G	T	T		S	S		B	T															.	.		S			S	S			.	.	.	.	.	.	.															T	T	.	.		S						S	S
Template Predicted Secondary structure																																					.	.									.	.	.	.	.	.	.																	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.								.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.				.	160	.	.	.
Predicted Secondary structure																																																												.	.	.	.											.	.	.
Query SS confidence																																																												.	.	.	.											.	.	.
Query Sequence		T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	.	.	.	.	D	V	D	L	L	P	E	L	I	T	.	.	.	P	R	S	R	I
Query Conservation																																																												.	.	.	.											.	.	.
Alig confidence																			.	.																																								.	.	.	.											.	.	.
Template Conservation																			.	.
Template Sequence		T	E	A	V	X	T	T	I	R	V	A	R	A	Y	T	G	R	.	.	T	K	I	X	K	F	A	G	C	Y	H	G	H	S	D	L	V	L	V	A	L	G	T	P	D	S	A	G	V	P	Q	S	I	A	Q	E	V	I	T	V	P	F	N	N	V	E	T	L	K	E	A	L	D	K	W	G	H	E	V	A	A
Template Known Secondary structure																			.	.							T	T					S	S	G	G	G	G	B					B	S	S	T	T							T	T						T	T													G	G	G
Template Predicted Secondary structure																			.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																	.	.
Query SS confidence																	.	.	.	.																																	.	.
Query Sequence		L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	.	.	.	.	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q	.	.	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L	Y	G	K	S	E
Query Conservation																	.	.	.	.																																	.	.
Alig confidence																	.	.	.	.																																	.	.
Template Conservation
Template Sequence		I	L	V	E	P	I	V	G	N	F	G	I	V	E	P	K	P	G	F	L	E	K	V	N	E	L	V	H	E	A	G	A	L	V	I	Y	D	E	V	I	T	A	F	R	F	X	Y	G	G	A	Q	D	L	L	G	V	T	P	D	L	T	A	L	G	V	I	G	G	G	L	P	I	G	A	Y	G	G	K	K	E
Template Known Secondary structure						S	S	B		T	T	S		B				T	T											T	T	T								T	T	T	T	T	T	S	S	S	S							T				S							T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	X	E	Q	V	A	P	L	G	P	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	G	T	X	A	G	N	P	A	S	X	A	S	G	I	A	C	L	E	V	L	Q	Q	E	G	L	Y	E	K	L	D	E	L	G	A	T	L	E	K	G	I	L	E	Q	A	A	K	H	N	I
Template Known Secondary structure				T	T	B	T	T	T	S	S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	T																T	S	T	T																							T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.																		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.															.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	G	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	T	L	.	N	R	L	K	G	A	L	T	V	Y	F	T	T	N	T	I	E	D	Y	D	A	A	Q	D	T	D	G	E	X	F	G	K	F	F	K	L	X	L	Q	E	G	V	N	L	A	P	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	A	W	F	L	T	T	E	H	T	K	E
Template Known Secondary structure						.				T	T							S	S	S				S							S															T	T					S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T
Template Predicted Secondary structure						.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.															.	.	.	.	.	.	.	.	410	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	D	A	L	V	N	A	V	D	R	A	L	E	L	L	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	E	Y	T	I	E	A	V	G	R	A	F	A	A	L	A	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions