Job Description Q46925 Confidence 99.46% Date Thu Jan 5 12:35:54 GMT 2012 Rank 235 Aligned Residues 281 % Identity 16% Template c3hvyC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine beta-lyase family protein, ynbb b.subtilis PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_348457.1) from clostridium acetobutylicum at3 2.00 a resolution Resolution 2.00 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	.	.	.	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G
Query Conservation																																																									.	.	.
Alig confidence																																					.	.	.									.	.	.							.	.	.															.	.	.	.
Template Conservation																																					.	.	.									.	.	.																								.	.	.	.
Template Sequence		L	K	V	L	K	A	F	Q	E	E	R	I	S	E	S	H	F	T	N	S	S	G	Y	G	Y	N	D	I	G	R	D	S	L	D	R	.	.	.	V	Y	A	N	I	F	N	T	.	.	.	E	S	A	F	V	R	P	H	F	V	N	G	T	H	A	I	G	A	A	L	F	G	N	.	.	.	.	L	R	P	N
Template Known Secondary structure											T	T			G	G	G	S					T	T		T	T										.	.	.							T		.	.	.	S						T	T		S	S												T	.	.	.	.			T	T
Template Predicted Secondary structure																																					.	.	.									.	.	.																								.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.									.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.					170	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																																			.	.										.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.																																			.	.										.	.	.	.
Query Sequence		D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	.	.	.	.	.	.	.	.	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	.	.	S	R	I	L	A	L	G	Q	M	.	.	.	.	S	N	V	T	G	G
Query Conservation																			.	.	.	.	.	.	.	.																																			.	.										.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																		.																	.	.										.	.	.	.
Template Conservation																																												.
Template Sequence		D	T	X	X	S	I	C	G	X	P	Y	D	T	L	H	D	I	I	G	X	D	D	S	K	K	V	G	S	L	R	E	Y	G	V	K	Y	K	X	V	D	L	K	.	D	G	K	V	D	I	N	T	V	K	E	E	L	K	K	D	D	S	I	K	L	I	H	I	Q	R	S	T	G	Y	G	W	R	K	S	L	R
Template Known Secondary structure							S	S	S	S			G	G	G					T			T	T			S			T	G	G	G	T									B	.	T	T	B														T	T								S	S			S	S	S	S
Template Predicted Secondary structure																																												.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																	.	.																																					.	.	.
Query SS confidence																	.	.																																					.	.	.
Query Sequence		C	P	D	L	A	R	A	I	T	F	A	H	S	A	G	.	.	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	.	.	.	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K
Query Conservation																	.	.																																					.	.	.
Alig confidence																	.	.																																					.	.	.
Template Conservation
Template Sequence		I	A	E	I	A	E	I	I	K	S	I	R	E	V	N	E	N	V	I	V	F	V	D	N	C	Y	G	E	F	V	E	E	K	E	P	T	D	V	G	A	D	I	I	A	G	S	L	I	K	N	I	G	G	G	I	A	T	T	G	G	Y	I	A	G	K	E	E	Y	V	T	Q	A	T	F	R	V	T	V	P	G
Template Known Secondary structure																	S	S	S							T	T	T	T	T	T	S	S	S		G	G	G	G	T		S						T	T	S	G	G	G	T	T	T			S																			S		T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	S	S	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.												.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		I	G	G	E	C	G	S	T	F	G	V	X	R	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	G	L	F	X	A	P	H	V	T	I	E	A	V	K	G	A	V	F	C	A	R	I	X	E	L	A	.	G	F	D	V	L	P	K	Y	N	D	K	R	T	D
Template Known Secondary structure		T	G	G	G					T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	T					S		T	T	S			S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.																							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.
			328	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure		.											.
Query SS confidence		.											.
Query Sequence		.	L	L	A	F	D	F	A	G	V	H	.	H	S	D	M	V	T	L	L	A	E
Query Conservation		.											.
Alig confidence		.											.
Template Conservation
Template Sequence		I	I	Q	A	I	K	F	N	D	E	K	K	L	I	D	F	I	K	G	I	Q	T
Template Known Secondary structure		S								S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions