Job Description Q46925 Confidence 99.92% Date Thu Jan 5 12:35:54 GMT 2012 Rank 157 Aligned Residues 346 % Identity 19% Template c3h7fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		A	A	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	.	.	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R
Query Conservation																								.	.
Alig confidence																								.	.																																.	.																						.	.
Template Conservation																																																									.	.																						.	.
Template Sequence		A	S	E	N	F	V	P	R	A	V	L	Q	A	Q	G	S	V	L	T	N	K	Y	A	E	G	L	P	G	R	R	Y	Y	G	G	C	E	H	V	D	V	V	E	N	L	A	R	D	R	A	K	A	L	F	G	A	.	.	E	F	A	N	V	Q	P	H	S	G	A	Q	A	N	A	A	V	L	H	A	L	.	.
Template Known Secondary structure		T	T													T	S	G	G	G	G							T	T			S	S	S																					T		.	.	S							S	S													.	.
Template Predicted Secondary structure																																																									.	.																						.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																				.																							.
Query SS confidence																				.																							.
Query Sequence		P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	.	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	.	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	R
Query Conservation																				.																							.
Alig confidence		.	.																	.																							.																								.
Template Conservation		.	.																																																																.
Template Sequence		.	.	M	S	P	G	E	R	L	L	G	L	D	L	A	N	G	G	H	L	T	H	G	M	R	L	N	F	S	G	K	L	Y	E	N	G	F	Y	G	V	D	P	A	T	H	L	I	D	M	D	A	V	R	A	T	A	L	E	F	R	P	K	V	I	I	.	A	G	W	S	A	Y	P	R	V	L	D	F	A	A
Template Known Secondary structure		.	.			T	T								G	G	G	T			G	G	G	T		T	T	S					S	S									T	T	T		S																S				.				S	S			S
Template Predicted Secondary structure		.	.																																																																.
Template SS confidence
				107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q	L	D	.	.	.	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.																	.																							.	.	.	.	.	.	.
Template Conservation																																																				.																							.	.	.	.	.	.	.
Template Sequence		F	R	S	I	A	D	E	V	G	A	K	L	L	V	D	M	A	H	F	A	G	L	V	A	A	G	L	H	P	S	P	V	P	H	A	D	V	V	S	T	T	V	H	T	L	G	G	G	R	S	.	G	L	I	V	G	K	Q	Q	Y	A	K	A	I	N	S	A	V	F	P	G	Q	Q	.	.	.	.	.	.	.
Template Known Secondary structure										T								T	T	T						T	T	S	S			S	T	T	T		S													S		.							G	G	G									T	T	T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.																							.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																																									.	.	.	.								.
Query SS confidence																																																									.	.	.	.								.
Query Sequence		G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	.	.	.	.	K	R	P	G	F	R	S	.	F	R	C	Q	D	S	S	L	L	A	F	D	F
Query Conservation																																																									.	.	.	.								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	I	A	A	T	P	E	F	A	D	R	Q	R	R	T	L	S	G	A	R	I	I	A	D	R	L	M	A	P	D	V	A	K	A	G	V	S	V	V	S	G	G	T	D	V	H	L	V	L	V	D	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	S	S																	T	S																						S	S						T	T				G	G	G	S		S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		334			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.					.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure			.	.																																																.	.	.	.
Query SS confidence			.	.																																																.	.	.	.
Query Sequence		A	.	.	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	.	.	.	.	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L	L	V	D
Query Conservation			.	.																																																.	.	.	.
Alig confidence			.	.																																.	.															.	.	.	.
Template Conservation																																				.	.
Template Sequence		R	D	S	P	L	D	G	Q	A	A	E	D	L	L	H	E	V	G	I	T	V	N	R	N	A	V	P	N	D	P	R	P	P	M	.	.	V	T	S	G	L	R	I	G	T	P	A	L	A	T	R	G	F	G	D	T	E	F	T	E	V	A	D	I	I	A	T	A	L	A	T	G	S	S
Template Known Secondary structure		T	T	S	S													T	T									T	T		S	S		T	T	.	.	T		S													T																			S	G	G	G
Template Predicted Secondary structure																																				.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions