Job Description Q46925 Confidence 99.96% Date Thu Jan 5 12:35:54 GMT 2012 Rank 80 Aligned Residues 323 % Identity 17% Template c3h14A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi Resolution 1.90 Å

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		18	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure														.																																																			.	.	.	.	.
Query SS confidence														.																																																			.	.	.	.	.
Query Sequence		D	A	G	V	Y	L	D	S	A	A	T	A	.	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	.	.	.	.	.	D	D	K	T	I	V	W	T	R	G	T	T
Query Conservation														.																																																			.	.	.	.	.
Alig confidence														.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	I	I	H	X	E	V	G	Q	P	G	T	G	A	P	R	G	A	V	E	A	L	A	K	S	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	P	A	L	R	Q	R	I	A	R	L	Y	G	E	W	Y	G	V	D	L	D	P	G	R	V	V	I	T	P	G	S	S
Template Known Secondary structure										S	S		S	S		S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							G	G	G					S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N
Query Conservation
Alig confidence												.	.	.	.																							.	.	.	.																								.
Template Conservation												.	.	.	.																							.	.	.	.																								.
Template Sequence		G	G	F	L	L	A	F	T	A	L	.	.	.	.	F	D	S	G	D	R	V	G	I	G	A	P	G	Y	P	S	Y	R	Q	I	L	R	.	.	.	.	A	L	G	L	V	P	V	D	L	P	T	A	P	E	N	R	L	Q	P	V	P	A	D	.	F	A	G	L	D	L	A	G	L	X	V	A	S	P	A	N
Template Known Secondary structure												.	.	.	.			T	T								S											.	.	.	.		T	T										G	G	G	T	T	S						.		T	T	S			S						S	S		T
Template Predicted Secondary structure												.	.	.	.																							.	.	.	.																								.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		172	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure												.	.	.																				.	.	.	.																													.	.
Query SS confidence												.	.	.																				.	.	.	.																													.	.
Query Sequence		V	T	G	G	C	P	D	L	A	R	.	.	.	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	.	.	.	.	A	V	H	F	P	A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	.	.	I	G	V	L	Y	G	K	S	E	L	L	E	A	M
Query Conservation												.	.	.																				.	.	.	.																													.	.
Alig confidence												.	.	.																				.	.	.	.																													.	.
Template Conservation
Template Sequence		P	T	G	T	X	L	D	H	A	A	X	G	A	L	I	E	A	A	Q	A	Q	G	A	S	F	I	S	D	E	I	Y	H	G	I	E	Y	E	A	K	A	V	T	A	L	E	L	T	D	E	C	Y	V	I	N	S	F	S	K	Y	F	S	X	T	G	W	R	V	G	W	X	V	V	P	E	D	Q	V	R	V	V
Template Known Secondary structure		T	T																			T	T								T	T	T	T		B	S	S	S					G	G	G	T		S	S	S						S	S	S	T	T			T	T	S									G	G	G
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	I	A	Q	N	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	C	A	P	H	A	S	Q	V	A	A	L	A	A	L	D	C	D	A	E	L	Q	A	N	L	D	V	Y	K	A	N	R	K	L	X	L	E	R	L	P	K	A	G	F	T	R	I	A	P
Template Known Secondary structure								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T															T	T																											T				B
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.																								260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.															.
Query SS confidence														.	.															.
Query Sequence		C	Q	D	S	S	L	L	A	F	D	F	A	.	.	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	.	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L
Query Conservation														.	.															.
Alig confidence														.	.															.																		.	.	.	.	.								.	.
Template Conservation																																																.	.	.	.	.								.	.
Template Sequence		P	D	G	A	F	Y	V	Y	A	D	V	S	D	L	T	D	D	S	R	A	F	A	A	E	I	L	E	K	A	G	V	A	V	T	P	G	L	D	F	D	P	E	R	G	A	G	.	.	.	.	.	T	L	R	F	S	Y	A	.	.	R	A	T	A	D	I	E	E	G	L	D	R	L	E	A	F	X	Q	A
Template Known Secondary structure				B	T	T							T	T	T		S																				G	G	G	T		T	T	T	G	G	G	.	.	.	.	.								.	.	S
Template Predicted Secondary structure																																																.	.	.	.	.								.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.						.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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