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Job DescriptionQ46925
Confidence99.86%DateThu Jan 5 12:35:54 GMT 2012
Rank204Aligned Residues351
% Identity12%Templatec3fcrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative aminotransferase; PDBTitle: crystal structure of putative aminotransferase (yp_614685.1) from2 silicibacter sp. tm1040 at 1.80 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.... .....30.........40.........50.........60.........70.........80.........90.
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Query Sequence  DAGVYLD. . . . . . SAATALKPEAVVEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTT
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Template Sequence  DGTKLLDAFAGLYCVNVGYGRQEIAEAIADQARELAYYHSYVGHG. . . . . TEASITLAKXILDRAPKNX. SKVYFGLGGS
Template Known Secondary structure  T

TTT

S
B

S




TT

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S
TT.SS
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   47..50.........60.........70.........80.........90. ........100.........110 .........120
 
   92.......100........ .110.........120.........130 .........140.........
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Query Sequence  ESINMVAQCYARPRLQP. . . . GDEIIVSVAEHHANLVPWLMVA. . . . . . . . . QQTGAKVVKLPLNAQRLPD. . . . . . . . .
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Template Sequence  DANETNVKLIWYYNNILGRPEKKKIISRWRGYHGSGLVTGSLTGLELFHKKFDLPVEQVIHTEAPYYFRREDLNQTEEQF
Template Known Secondary structure  TT
TT

TT



SSS

GGGTTTTT
S
TT

S
GGG
S
TT

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   121........130.........140.........150.........160.........170.........180.........190.........200
 
   150....... ..160.........170........ .180.........190.........200... ......210..
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Query Sequence  . . . . VDLLPELI. . . . TPRSRILALGQMSNVTGGCPD. . . . LARAITFAHSAGMVVMVDGAQGAVH. . . . . FPADVQQLD
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Template Sequence  VAHCVAELEALIEREGADTIAAFIGEPILGTGGIVPPPAGYWEAIQTVLNKHDILLVADEVVTGFGRLGTXFGSDHYGLE
Template Known Secondary structure 
GGG
SSBSTTT
B


TTT

TTTSSSTTSSS
T

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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   213......220.........230.........240.........250.........260.........270.........280.........290..
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Query Sequence  IDFYAFSGHKLYGPTGIGVLYGKSELLEAMSPWLGGGKMVHEVSFDGFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADY
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Template Sequence  PDIITIAKGLTSAYAPLSGSIVSDKVWKVLEQ. . . . . . . . . . . . . GTDENGPIGHGWTYSAHPIGAAAGVANLKLLDELN
Template Known Secondary structure 
S
GGGTTTSS

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S
S


TTTT
TT
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   281........290.........300.........310.. .......320.........330.........340.......
 
   293......300.........310.........320.........330....... ..340.........350.........360
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Query Sequence  DINQAESWSRSLATLAEDALAKRPGFRSFRCQDSSLLAFDFAGVH. . . . . . . . . . . . HSDMVTLLAEYGIALRAGQHCAQ
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Template Sequence  LVSNAGEVGAYLNATXAEALSQHA. NVGDVRGEGLLCAVEFVKDRDSRTFFDAADKIGPQISAKLLEQDKIIARAXP. . .
Template Known Secondary structure  TTST.TSSS

SBTTTTB


GGG



S...
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   348.350.........360.........370. ........380.........390.........400.........410.........420...
 
   361........370.........380.........390........
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Query Sequence  PLLAELGVTGTLRASFAPYNTKSDVDALVNAVDRALEL
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Template Sequence  . . . . . . . QGDILGFAPPFCLTRAEADQVVEGTLRAVKA
Template Known Secondary structure  .......SSS


TT

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   424.....430.........440.........450....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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