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Job DescriptionQ46925
Confidence99.98%DateThu Jan 5 12:35:54 GMT 2012
Rank37Aligned Residues338
% Identity15%Templatec3f9tB_
PDB info PDB header:lyaseChain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
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Query Sequence  YLDSAATALKPEAVVEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCY
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Template Sequence  NIFGSXCSNVLPITRKIVDIFLETNLGDPGLF. . . . . KGTKLLEEKAVALLGSLLNNKD. AYGHIVSGGTEANLXALRCI
Template Known Secondary structure 
B
S
S




TTT

TTSGGG
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S
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   32.......40.........50.........60... ......70.........80..... ....90.........100.....
 
   102.. .....110.........120.........130.........140.........150.........160...... ...170.
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Query Sequence  ARP. . . . . . . . . RLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPRSRILAL. GQMSN
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Template Sequence  KNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGRE. . . . XXDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTT
Template Known Secondary structure  TT



SS
TT

T....T

B
TTSSB
S


BS
T
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   106...110.........120.........130.........140 .........150.........160.........170.........180.
 
   172.......180.........190.........200.........210. ........220.... .....230.......
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Query Sequence  VTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQL. . . . . . . . . . . . . DIDFYAFSGHKLY. GPTGIGVLYGKSE
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Template Sequence  ELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKXGHCPIPSGGILFKDI
Template Known Secondary structure  TT

B

T

TTGGGTGGG

GGG

TT




SGGGT
S

TTTTT


SS
SSG
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   182.......190.........200.........210.........220.........230.........240.........250.........260.
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  LLEAMSPWLGGGKMVHEVSFDGFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADYDINQAESWSRSLATLAEDALAKRPG
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Template Sequence  GYKRYLDVDAPYLTETR. . . . . . . . . . . . QATILGTRVGFGGACTYAVLRYLGREGQRKIVNECXENTLYLYKKLKEN. N
Template Known Secondary structure  GGGGGT

TTSSSS............
SS
SS

ST.T
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   262.......270........ .280.........290.........300.........310.........320....... .
 
   318.320.........330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  FRSFRCQDSSLLAFDFAGVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAVDRA
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Template Sequence  FKPVIEPILNIVAIE. . DEDYKEVCKKLRDRGIYVSVCNCV. . . . . . . . . . . KALRIVVXPHIKREHIDNFIEILNSI
Template Known Secondary structure 

BSS

SSS..
TTTT
B

SSS...........S

TT

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   329330.........340... ......350.........360....... ..370.........380.........390...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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