Job Description Q46925 Confidence 100.00% Date Thu Jan 5 12:35:54 GMT 2012 Rank 32 Aligned Residues 333 % Identity 19% Template c3eucB_ PDB info PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase 2; PDBTitle: crystal structure of histidinol-phosphate aminotransferase2 (yp_297314.1) from ralstonia eutropha jmp134 at 2.05 a resolution Resolution 2.05 Å

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		3	.	.	.	.	.	.	10	.	.	.												.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	N	P	A	Q	F	R	A	Q	F	.	.	.	.	.	.	.	.	.	.	.	P	A	L	Q	D	A	G	V	Y	L	D	S	A	A	T	A	L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K
Query Conservation													.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	D	P	S	L	I	E	R	I	I	R	D	D	V	R	A	X	G	A	Y	H	V	P	D	S	H	G	L	V	K	L	D	A	X	E	N	Y	R	L	P	P	A	L	R	S	E	L	A	A	R	L	G	E	V	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	R	A	K
Template Known Secondary structure		S										S							S									T	T	S				S	S	S																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																		60	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D
Query Conservation
Alig confidence																																.	.	.	.																							.	.	.	.
Template Conservation																																.	.	.	.																							.	.	.	.
Template Sequence		L	K	E	V	X	Q	V	P	A	G	X	E	V	L	L	G	N	G	S	D	E	I	I	S	X	L	A	L	A	A	.	.	.	.	A	R	P	G	A	K	V	X	A	P	V	P	G	F	V	X	Y	A	X	S	A	Q	.	.	.	.	F	A	G	L	E	F	V	G	V	P	L	R	A	D	F	T	L	D	R	G
Template Known Secondary structure							T			T	T																				T	.	.	.	.			T	T								S											.	.	.	.		T	T										T	T
Template Predicted Secondary structure																																.	.	.	.																							.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		152		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure			.																														.	.	.																											.	.	.	.	.
Query SS confidence			.																														.	.	.																											.	.	.	.	.
Query Sequence		L	.	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	R	.	.	.	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	.	.	.	.	.	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K
Query Conservation			.																														.	.	.																											.	.	.	.	.
Alig confidence			.																														.	.	.																											.	.	.	.	.
Template Conservation
Template Sequence		A	X	L	A	A	X	A	E	H	Q	P	A	I	V	Y	L	A	Y	P	N	N	P	T	G	N	L	F	D	A	A	D	X	E	A	I	V	R	A	A	Q	G	S	V	C	R	S	L	V	V	V	D	E	A	Y	Q	P	F	A	Q	E	S	W	X	S	R	L	T	D	F	G	N	L	L	V	X	R	T	V	S	K
Template Known Secondary structure													S						S	S		T	T	T																T	B	T	T	S		B								T	T			S	S	S			S	G	G	G	G	G	T		T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		223	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		L	Y	.	G	P	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S
Query Conservation				.
Alig confidence				.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	L	A	G	I	R	L	G	Y	V	A	G	D	P	Q	W	L	E	Q	L	D	K	V	R	P	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	N	V	L	T	E	A	T	A	L	F	A	L	E	H	V	A	V	L	D	E	Q	A	A	Q	L
Template Known Secondary structure		T	T		S	S																	G	G	G	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S													T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.																										.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T
Query Conservation
Alig confidence																						.													.	.																										.	.	.	.	.	.											.	.	.
Template Conservation																						.													.	.																										.	.	.	.	.	.											.	.	.
Template Sequence		R	A	E	R	S	R	V	A	E	G	X	A	A	H	G	G	V	T	V	F	.	P	S	A	A	N	F	L	L	A	R	V	P	.	.	D	A	A	Q	T	F	D	R	L	L	A	R	K	V	L	I	K	N	V	S	K	X	H	P	L	.	.	.	.	.	.	L	A	N	C	L	R	V	T	V	S	.	.	.	T
Template Known Secondary structure														T	S	T	T					.			S	S	S							S	.	.												T	T							T	T	S		G	G	.	.	.	.	.	.	G	T	T								.	.	.
Template Predicted Secondary structure																						.													.	.																										.	.	.	.	.	.											.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.							.	340	.	.	.	.	.	.	.	.				.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	E	N	A	Q	F	L	E	A	F	A	A	S	L	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions