Job Description Q46925 Confidence 99.95% Date Thu Jan 5 12:35:54 GMT 2012 Rank 114 Aligned Residues 370 % Identity 14% Template c3e2yB_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:kynurenine-oxoglutarate transaminase 3; PDBTitle: crystal structure of mouse kynurenine aminotransferase iii in complex2 with glutamine Resolution 2.26 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																		.																.																																															.
Query SS confidence																		.																.																																															.
Query Sequence		M	N	V	F	N	P	A	Q	F	R	A	Q	F	P	A	L	.	Q	D	A	G	V	Y	L	D	S	A	A	T	A	L	K	.	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	.
Query Conservation																		.																.																																															.
Alig confidence																		.																.																.	.	.	.																												.
Template Conservation																																																		.	.	.	.
Template Sequence		I	E	G	L	D	S	N	V	W	V	E	F	T	K	L	A	A	D	P	S	V	V	N	L	G	Q	G	F	P	D	I	S	P	P	S	Y	V	K	E	E	L	S	K	A	A	F	I	D	.	.	.	.	N	M	N	Q	Y	T	R	G	F	G	H	P	A	L	V	K	A	L	S	C	L	Y	G	K	I	Y	Q	R
Template Known Secondary structure		G	T	T									T		S	T	T		S	T	T					S	S					S															T	S	G	.	.	.	.	G	G	G	S				T	T																		T	S
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
			78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure		.																																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		.	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	.	.	.	.	.	.	.	.	.	.
Query Conservation		.																																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence		.																									.	.	.	.																							.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.																							.	.	.	.
Template Sequence		Q	I	D	P	N	E	E	I	L	V	A	V	G	A	Y	G	S	L	F	N	S	I	Q	G	L	.	.	.	.	V	D	P	G	D	E	V	I	I	M	V	P	F	Y	D	C	Y	E	P	M	V	R	.	.	.	.	M	A	G	A	V	P	V	F	I	P	L	R	S	K	P	T	D	G	M	K	W	T	S	S	D
Template Known Secondary structure					T	T	T	S					S														.	.	.	.			T	T								S			T	T							.	.	.	.		T	T															S	S			B	G	G	G
Template Predicted Secondary structure																											.	.	.	.																							.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
			147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.																																	.	.	.
Query SS confidence		.																																	.	.	.
Query Sequence		.	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	.	.	.	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K
Query Conservation		.																																	.	.	.
Alig confidence		.																																	.	.	.																																.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.
Template Sequence		W	T	F	D	P	R	E	L	E	S	K	F	S	S	K	T	K	A	I	I	L	N	T	P	H	N	P	L	G	K	V	Y	T	R	Q	E	L	Q	V	I	A	D	L	C	V	K	H	D	T	L	C	I	S	D	E	V	Y	E	W	L	V	Y	T	G	H	T	H	.	.	.	.	.	.	.	.	V	K	I	A	T
Template Known Secondary structure															T	T								S	S		T	T	T																				T								T	T	T	T		B		T	T				.	.	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260									.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		L	Y	G	P	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	.	.	.	A	D	Y	D	I	N	Q	A	E	S
Query Conservation																																																																					.	.	.
Alig confidence																																																																					.	.	.
Template Conservation
Template Sequence		L	P	G	M	W	E	R	T	I	T	I	G	S	A	G	K	T	F	S	V	T	G	W	K	L	G	W	S	I	G	P	A	H	L	I	K	H	L	Q	T	V	Q	Q	N	S	F	Y	T	C	A	T	P	L	Q	A	A	L	A	E	A	F	W	I	D	I	K	R	M	D	D	P	E	C	Y	F	N	S	L	P	K
Template Known Secondary structure		S	T	T	T	G	G	G											S	S		G	G	G																					T	T	T																				T	T	T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.													.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	G	.	.	.	.	.	.	.	.	.	.	.	.	V	H	H	S	D	M	V	T	L	L	.	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																		.																				.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																		.
Template Sequence		E	L	E	V	K	R	D	R	M	V	R	L	L	N	S	V	.	G	L	K	P	I	V	P	D	G	G	Y	F	I	I	A	D	V	S	S	L	G	A	D	L	S	D	M	N	S	D	E	P	Y	D	Y	K	F	V	K	W	M	T	K	H	K	K	L	T	A	I	P	V	S	A	F	C	D	S	K	S	K	P	H
Template Known Secondary structure																T	T	.	T					B		S	B	S	S							T	T	S					T	T	T				S															S						G	G	G	G	S		T	T	T
Template Predicted Secondary structure																		.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R
Query Conservation
Alig confidence			.										.	.
Template Conservation			.										.	.
Template Sequence		F	.	E	K	L	V	R	F	C	F	I	.	.	K	K	D	S	T	L	D	A	A	E	E	I	F	R	A
Template Known Secondary structure			.	T	T								.	.															T
Template Predicted Secondary structure			.										.	.
Template SS confidence
		425		.	.	.	.	430	.	.	.	.			.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions