Job Description Q46925 Confidence 99.94% Date Thu Jan 5 12:35:54 GMT 2012 Rank 134 Aligned Residues 309 % Identity 14% Template c3d6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae Resolution 2.00 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100											.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	.	.	.	.	.	.	.	.	.	.	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A
Query Conservation																																					.	.	.	.	.	.	.	.	.	.
Alig confidence															.																						.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation															.																																																											.	.	.	.
Template Sequence		A	D	I	R	E	L	W	A	E	A	L	G	L	.	P	A	D	L	V	V	A	Q	D	G	S	S	L	N	I	X	F	D	L	I	S	W	S	Y	T	W	G	N	N	D	S	S	R	P	W	S	A	E	E	K	V	K	W	L	C	P	V	P	G	Y	D	R	H	F	T	I	T	E	.	.	.	.	H	F	G	F
Template Known Secondary structure													T		.		G	G	G					S	S																			T	T		S	S		G	G	G	S	S									S											.	.	.	.		T	T
Template Predicted Secondary structure															.																																																											.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																				.	.	.	.
Query SS confidence																																					.	.																				.	.	.	.
Query Sequence		K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	.	.	N	V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	A	.	.	.	.	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q
Query Conservation																																					.	.																				.	.	.	.
Alig confidence													.																								.	.																				.	.	.	.
Template Conservation													.
Template Sequence		E	X	I	N	V	P	X	T	D	E	G	.	P	D	X	G	V	V	R	E	L	V	K	D	P	Q	V	K	G	X	W	T	V	P	V	F	G	N	P	T	G	V	T	F	S	E	Q	T	C	R	E	L	A	E	X	S	T	A	A	P	D	F	R	I	V	W	D	N	A	Y	A	L	H	T	L	S	D	E	F	P
Template Known Secondary structure										T	T		.										T	T	S	T	T									S	S		T	T	T																		S	S	T	T								T	T	T	T		B	S	S	S
Template Predicted Secondary structure													.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
															210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	.	G	P	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	H	N	V	I	E	F	A	Q	A	A	G	N	P	N	R	F	W	F	X	S	S	T	S	K	I	T	H	A	G	S	G	V	S	F	F	A	S	S	K	E	N	I	E	W	Y	A	S	H	A	N	V	R	G	I	G	P	N	K	L	N	Q	L	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T		T	T								S	T	T	T	S		T	T	S	S																							S											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	Q	F	F	G	D	V	A	G	L	K	A	H	X	L	K	H	A	A	S	L	A	P	K	F	E	R	V	L	E	I	L	D	S	R	L	S	E	Y	G	V	A	K	W	T	S	P	T	G	G	Y	F	I	S	V	D	V	V	P	G	T	A	S	R	V	V	E	L	A	K	E	A	G	I	A	L	T	G	A
Template Known Secondary structure		.						S																															G	G	G		S							S	B	S	S							S	T	T												T	T						T
Template Predicted Secondary structure		.
Template SS confidence
			296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L
Query Conservation
Alig confidence												.	.											.
Template Conservation												.	.											.
Template Sequence		G	S	S	F	P	L	H	N	D	P	.	.	N	N	E	N	I	R	L	A	P	S	.	L	P	P	V	A	E	L	E	V	A	X	D	G	F	A	T	C	V	L	X
Template Known Secondary structure		T	T	T	S	G	G	G			T	.	.	T	S								S	.	S	S
Template Predicted Secondary structure												.	.											.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.			.	.	.	.	.	390	.	.	.	.		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions