Job Description Q46925 Confidence 99.96% Date Thu Jan 5 12:35:54 GMT 2012 Rank 64 Aligned Residues 324 % Identity 15% Template c3cq6E_ PDB info PDB header:transferase Chain: E: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: histidinol-phosphate aminotransferase from corynebacterium2 glutamicum holo-form (plp covalently bound ) Resolution 2.10 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure															.																																																		.	.	.	.	.
Query SS confidence															.																																																		.	.	.	.	.
Query Sequence		D	A	G	V	Y	L	D	S	A	A	T	A	L	.	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	.	.	.	.	.	D	D	K	T	I	V	W	T	R	G	T	T
Query Conservation															.																																																		.	.	.	.	.
Alig confidence															.																														.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		N	V	D	I	R	L	N	T	N	E	N	P	Y	P	P	S	E	A	L	V	A	D	L	V	A	T	V	D	K	I	A	T	E	L	N	R	Y	P	E	R	D	A	V	.	.	.	.	.	.	.	E	L	R	D	E	L	A	A	Y	I	T	K	Q	T	G	V	A	V	T	R	D	N	L	W	A	A	N	G	S	N
Template Known Secondary structure				S				S	S					S																		G	G	G	T	T	S				T	T			.	.	.	.	.	.	.															S					G	G	G					S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.								70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	.	T	P	R	S	R	I	L	A	L	G	Q	M	S
Query Conservation																																																																				.
Alig confidence												.	.	.	.																							.	.	.	.																											.
Template Conservation												.	.	.	.																							.	.	.	.
Template Sequence		E	I	L	Q	Q	L	L	Q	A	F	.	.	.	.	G	G	P	G	R	T	A	L	G	F	Q	P	S	Y	S	M	H	P	I	L	A	K	.	.	.	.	G	T	H	T	E	F	I	A	V	S	R	G	A	D	F	R	I	D	M	D	V	A	L	E	E	I	R	A	K	Q	P	D	I	V	F	V	T	T	P	N
Template Known Secondary structure												.	.	.	.	S		T	T								S			T								.	.	.	.		T	T										T	T	S	S																S						S	S
Template Predicted Secondary structure												.	.	.	.																							.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																.	.	.	.																													.	.
Query SS confidence																																.	.	.	.																													.	.
Query Sequence		N	V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	.	.	.	.	A	V	H	F	P	A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	.	.	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P
Query Conservation																																.	.	.	.																													.	.
Alig confidence																																.	.	.	.																													.	.
Template Conservation
Template Sequence		N	P	T	G	D	V	T	S	L	D	D	V	E	R	I	I	N	V	A	P	G	I	V	I	V	D	E	A	Y	A	E	F	S	P	S	P	S	A	T	T	L	L	E	K	Y	P	T	K	L	V	V	S	R	T	M	S	A	F	D	F	A	G	G	R	L	G	Y	F	V	A	N	P	A	F	I	D	A	V	M	L
Template Known Secondary structure		T	T	T																	S	S							T	T	G	G	G		S	S			G	G	G	G	T	T	T		T	T	T											S		G	G	G																T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.						.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.						.
Template Sequence		V	R	L	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	S	A	L	S	Q	A	A	A	I	V	A	L	R	H	S	A	D	T	L	G	T	V	E	K	L	S	V	E	R	V	R	V	A	A	R	L	E	E	L	.	G	Y	A	V	V	.	P	S
Template Known Secondary structure		T	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S														T					T	T																				.	T					.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.						.
Template SS confidence
		253	.	.	.	.																										.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.		.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	S	L	L	A	F	D	F	A	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L
Query Conservation
Alig confidence													.																				.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation													.																				.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		E	S	N	F	V	F	F	G	D	F	S	.	D	Q	H	A	A	W	Q	A	F	L	D	R	G	V	L	I	R	D	V	.	.	.	.	.	.	.	.	.	.	.	G	I	A	G	H	L	R	T	T	I	G	.	.	.	V	P	E	E	N	D	A	F	L	D	A	A	A	E	I	I	K	L
Template Known Secondary structure		S	S	S								S	.	S											T	T				B			.	.	.	.	.	.	.	.	.	.	.	S		T	T								.	.	.																	T	T
Template Predicted Secondary structure													.																				.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.												.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions