Job Description Q46925 Confidence 99.95% Date Thu Jan 5 12:35:54 GMT 2012 Rank 91 Aligned Residues 334 % Identity 15% Template c3b46B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase bna3; PDBTitle: crystal structure of bna3p, a putative kynurenine2 aminotransferase from saccharomyces cerevisiae Resolution 2.00 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		L	K	P	E	A	V	V	E	A	T	Q	Q	F	Y	S	L	S	A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	.	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P
Query Conservation																																																				.
Alig confidence																			.	.	.	.																														.																							.	.	.	.
Template Conservation																			.	.	.	.																																																					.	.	.	.
Template Sequence		S	P	P	Q	F	A	I	K	E	A	Q	K	A	L	D	I	P	.	.	.	.	M	V	N	Q	Y	S	P	T	R	G	R	P	S	L	I	N	S	L	I	K	L	Y	S	P	I	Y	N	T	E	L	K	A	E	N	V	T	V	T	T	G	A	N	E	G	I	L	S	C	L	M	G	L	.	.	.	.	L	N	A
Template Known Secondary structure															T	T	S	G	.	.	.	.	G	G	G	S				T	T																	T	T	S				G	G	G					S														.	.	.	.			T
Template Predicted Secondary structure																			.	.	.	.																																																					.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.													.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	.	.	.	.	.	.	.	.	.	.	.	.	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		G	D	E	V	I	V	F	E	P	F	F	D	Q	Y	I	P	N	I	E	.	.	.	.	L	C	G	G	K	V	V	Y	V	P	I	N	P	P	K	E	L	D	Q	R	N	T	R	G	E	E	W	T	I	D	F	E	Q	F	E	K	A	I	T	S	K	T	K	A	V	I	I	N	T	P	H	N	P	I	G	K	V
Template Known Secondary structure		T								S			T	T							.	.	.	.		T	T												T	T	T	T	T	S		B		G	G	G	S										T			T	T								S	S		T	T	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		177	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210										.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.
Predicted Secondary structure				.	.	.																																	.	.	.	.	.	.	.	.	.																									.
Query SS confidence				.	.	.																																	.	.	.	.	.	.	.	.	.																									.
Query Sequence		P	D	.	.	.	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q	.	.	.	.	.	.	.	.	.	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L	Y	G	.	K	S	E	L	L	E	A	M	S
Query Conservation				.	.	.																																	.	.	.	.	.	.	.	.	.																									.
Alig confidence				.	.	.																																	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		F	T	R	E	E	L	T	T	L	G	N	I	C	V	K	H	N	V	V	I	I	S	D	E	V	Y	E	H	L	Y	F	T	D	S	F	T	R	I	A	T	L	S	P	E	I	G	Q	L	T	L	T	V	G	S	A	G	S	F	A	A	T	G	W	R	I	G	W	V	L	S	L	N	A	E	L	L	S	Y	A	A
Template Known Secondary structure																		T								T	T	T	T		B		S	S					G	G	G	S						T	T											S		T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Template Sequence		K	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	I	C	F	A	S	P	S	P	L	Q	E	A	C	A	N	S	I	N	D	A	L	K	I	G	Y	F	E	K	M	R	Q	E	Y	I	N	K	F	K	I	F	T	S	I	F	D	E	L	.	G	L	P	Y	T	A	P
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	S	S																				T																								.	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Template SS confidence
		296	.	.																					.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.																		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	D	S	S	L	L	A	F	D	F	A	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.										.	.
Template Conservation																																																															.										.	.
Template Sequence		E	G	T	Y	F	V	L	V	D	F	S	K	V	K	I	P	E	D	Y	P	Y	P	E	E	I	L	N	K	G	K	D	F	R	I	S	H	W	L	I	N	E	L	G	V	V	A	I	P	P	T	E	F	Y	I	K	E	H	E	K	A	A	.	E	N	L	L	R	F	A	V	C	.	.	K	D	D	A	Y	L	E
Template Known Secondary structure		S	B	S	S							T	T	S				T	T					G	G	G	T	S	S																			B		G	G	G	G	S		G	G	G	G	G	G	G	.	T	T								.	.	S
Template Predicted Secondary structure																																																															.										.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.		.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.
		387	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	N	A	V	D	R	A	L	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	V	E	R	L	K	L	L	K	D	Y	L
Template Known Secondary structure								G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions