Job Description Q46925 Confidence 99.90% Date Thu Jan 5 12:35:54 GMT 2012 Rank 184 Aligned Residues 310 % Identity 14% Template c2x5fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate_tyrosine_phenylalanine pyridoxal-5' PDBTitle: crystal structure of the methicillin-resistant2 staphylococcus aureus sar2028, an3 aspartate_tyrosine_phenylalanine pyridoxal-5'-phosphate4 dependent aminotransferase Resolution 1.80 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.								.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		E	A	A	R	E	K	V	A	Q	L	L	N	A	.	.	.	.	.	.	.	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																								.	.	.	.																								.	.	.
Template Conservation																																													.	.	.	.																								.	.	.
Template Sequence		E	E	L	R	D	L	W	Q	Q	K	M	L	R	D	N	P	E	L	S	I	D	N	M	S	R	P	I	V	T	N	A	L	T	H	G	L	S	L	V	G	D	L	F	.	.	.	.	V	N	Q	D	D	T	I	L	L	P	E	H	N	W	G	N	Y	K	L	V	F	N	T	.	.	.	R	N	G	A	N	L	Q
Template Known Secondary structure																	T	T			G	G	G	B							S														.	.	.	.			T	T							S	S			T							T	T	.	.	.	T	T
Template Predicted Secondary structure																																													.	.	.	.																								.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.
		139	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.									.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure						.																					.	.	.																											.	.	.	.	.	.	.	.
Query SS confidence						.																					.	.	.																											.	.	.	.	.	.	.	.
Query Sequence		K	L	P	L	.	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	.	.	.	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	.	.	.	.	.	.	.	.	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A
Query Conservation						.																					.	.	.																											.	.	.	.	.	.	.	.
Alig confidence						.																					.	.	.																											.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		T	Y	P	I	F	D	K	D	G	H	Y	T	T	D	S	L	V	E	A	L	Q	S	Y	N	K	D	K	V	I	M	I	L	N	Y	P	N	N	P	T	G	Y	T	P	T	H	K	E	V	T	T	I	V	E	A	I	K	A	L	A	N	K	G	T	K	V	I	A	V	V	D	D	A	Y	.	.	.	.	Y	G	L
Template Known Secondary structure						B		T	T	S		B		S												S	S								S	S		T	T	T																						T	T										T	T	.	.	.	.	T	T
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.							.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	.	.	.	.	.	.	W	K	L	E	A	G	T	P	N	V	A	G	V	I
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.
Template Conservation
Template Sequence		F	Y	E	D	V	Y	T	Q	S	L	F	T	A	L	T	N	L	H	S	N	A	I	L	P	I	R	L	D	G	A	T	K	E	F	F	A	W	G	F	R	V	G	F	M	T	F	G	T	S	D	Q	T	T	K	E	V	L	E	A	K	V	K	G	L	I	R	S	N	I	S	S	G	P	L	P	T	Q	S	A	V
Template Known Secondary structure		B		S	S				S								T	T			T	T													T	T		G	G	G								B																				T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																																.
Query SS confidence																																				.	.	.																																.
Query Sequence		G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	.	.	.	R	P	G	F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	G	V	H	H	S	D	M	V	T	L	L	.	A	E	Y	G	I	A	L	R	A	G	Q
Query Conservation																																				.	.	.																																.
Alig confidence																																				.	.	.																																.
Template Conservation
Template Sequence		K	H	V	L	K	N	N	K	Q	F	D	K	E	I	E	Q	N	I	Q	T	L	K	E	R	Y	E	V	T	K	E	V	V	Y	A	D	Q	Y	H	S	H	W	Q	A	Y	D	F	N	S	G	Y	F	M	A	I	K	V	H	D	V	D	P	E	A	L	R	K	H	L	I	D	K	Y	S	I	G	V	I	A	L	N
Template Known Secondary structure					T	T	T																											T		G	G	G	T	T	T								B	S	S							S	S	S													T								S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L	L
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.								.
Template Sequence		A	T	.	.	.	.	.	.	.	.	.	.	.	.	D	I	R	I	A	F	S	.	C	V	E	K	D	D	I	P	H	V	F	D	S	I	A	K	A	I	D	D	L
Template Known Secondary structure		S	S	.	.	.	.	.	.	.	.	.	.	.	.						G	G	.	G	S		G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.								.
Template SS confidence
		398	.													400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions