Job Description Q46925 Confidence 99.84% Date Thu Jan 5 12:35:54 GMT 2012 Rank 220 Aligned Residues 282 % Identity 18% Template c2x3lA_ PDB info PDB header:lyase Chain: A: PDB Molecule:orn/lys/arg decarboxylase family protein; PDBTitle: crystal structure of the orn_lys_arg decarboxylase family2 protein sar0482 from methicillin-resistant staphylococcus3 aureus Resolution 2.00 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N
Query Conservation
Alig confidence																	.	.	.																					.	.	.	.																							.	.	.	.
Template Conservation																	.	.	.																					.	.	.	.																							.	.	.	.
Template Sequence		V	I	L	K	S	M	K	Q	V	E	K	H	S	D	Y	.	.	.	D	G	Y	F	L	V	N	G	T	T	S	G	I	L	S	V	I	Q	S	F	.	.	.	.	S	Q	K	K	G	D	I	L	M	A	R	N	V	H	K	S	V	L	H	A	L	D	.	.	.	.	I	S	Q	Q	E	G	H	F	I	E	T	H
Template Known Secondary structure												S		T	T		.	.	.						S	S												T	T	.	.	.	.	T	T	S	S	S						T	T											.	.	.	.			T
Template Predicted Secondary structure																	.	.	.																					.	.	.	.																							.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	.	.	.	.	A	V	H	F	P	A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S
Query Conservation																																																											.	.	.	.
Alig confidence								.	.	.	.																	.																															.	.	.	.
Template Conservation								.	.	.	.																	.
Template Sequence		Q	S	P	L	T	N	.	.	.	.	H	Y	N	K	V	N	L	H	K	L	V	V	L	T	Y	P	.	N	Y	Y	G	E	T	F	N	V	E	E	V	I	K	S	L	H	Q	L	N	I	P	V	L	I	D	E	A	H	G	A	H	F	G	L	Q	G	F	P	D	S	T	L	N	Y	Q	A	D	Y	V	V	Q	S
Template Known Secondary structure				T	T	T	S	.	.	.	.	S														S	S	.		T	T	S															T	T								T	T		T	T	T	T	S	T	T	S				G	G	G	G	T		S
Template Predicted Secondary structure								.	.	.	.																	.
Template SS confidence
		127	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	K	L	Y	G	P	T	G	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	H	T	L	P	A	L	T	M	G	S	V	L	Y	I	H	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	Y	R	E	N	I	I	E	Y	L	S	Y	F	Q	T	S	S	P	S	Y	L	I	M	A	S	L	E	S	A	A	Q	F	Y	K	T	Y	D	S	T	L	F	F	A
Template Known Secondary structure						S	S		T	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T												S		S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	S	S	L	L	A	F	D	F	A	G	V	H	H	S	D	M	V	T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	V	T	G	T	L	R	A	S	F	A	P	Y
Query Conservation
Alig confidence														.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	A	Q	L	I	E	C	L	E	N	K	.	.	.	.	.	G	F	E	M	L	Q	V	D	D	P	L	K	L	L	I	K	Y	E	G	F	T	G	H	D	I	Q	N	W	F	M	N	A	H	I	Y	L	E	L	A	D	D	Y	Q	A	.	.	.	.	.	.	.	.	.	.	L	A	I	L	P	L	W	H	H
Template Known Secondary structure														.	.	.	.	.	T							S	S	T	T							T	T	S												T	T				S				S	S			.	.	.	.	.	.	.	.	.	.									T
Template Predicted Secondary structure														.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.						.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.											.	.	330	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	K	S	D	V	D	A	L	V	N	A	V	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	T	Y	L	F	D	S	L	L	R	K	I	E	D
Template Known Secondary structure		T														T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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