Job Description Q46925 Confidence 99.93% Date Thu Jan 5 12:35:54 GMT 2012 Rank 147 Aligned Residues 308 % Identity 17% Template c2nmpC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine gamma-lyase; PDBTitle: crystal structure of human cystathionine gamma lyase Resolution 2.60 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	N	V	H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W
Query Conservation
Alig confidence						.																												.	.	.																			.	.	.	.	.
Template Conservation						.																												.	.	.																			.	.	.	.	.
Template Sequence		Q	G	A	P	.	G	Q	G	F	E	Y	S	R	S	G	N	P	T	R	N	C	L	E	K	A	V	A	A	L	D	G	A	.	.	.	K	Y	C	L	A	F	A	S	G	L	A	A	T	V	T	I	T	H	.	.	.	.	.	L	L	K	A	G	D	Q	I	I	C	M	D	D	V	Y	G	G	T	N	R	Y	F
Template Known Secondary structure			S	S	T	.	T					B	G	G	G																T	T		.	.	.	S						S	S										T	.	.	.	.	.	T	S		T	T							S	S
Template Predicted Secondary structure						.																												.	.	.																			.	.	.	.	.
Template SS confidence
		49	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		L	M	V	A	Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	A	G	.	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P
Query Conservation																																																																		.
Alig confidence																			.	.	.	.	.																																											.											.
Template Conservation																			.	.	.	.	.																																																						.
Template Sequence		R	Q	V	A	S	E	F	G	L	K	I	S	F	V	D	C	S	.	.	.	.	.	K	I	K	L	L	E	A	A	I	T	P	E	T	K	L	V	W	I	E	T	P	T	N	P	T	Q	K	V	I	D	I	E	G	C	A	H	I	V	H	K	H	G	D	I	I	L	V	V	D	N	T	F	M	.	S	P	Y	F
Template Known Secondary structure				T	G	G	G	T	T									S	.	.	.	.	.	S										T	T								S	S		T	T	T														T	T	S	S	S								T	T	T	.
Template Predicted Secondary structure																			.	.	.	.	.																																																						.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																									.	.	.							.
Query SS confidence																									.	.	.							.
Query Sequence		A	D	V	Q	Q	L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	.	.	.	I	G	V	L	Y	G	.	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G
Query Conservation																									.	.	.							.
Alig confidence																									.	.	.							.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	P	L	A	L	G	A	D	I	S	M	Y	S	A	T	K	Y	M	N	G	H	S	D	V	V	M	G	L	V	S	V	N	C	E	S	L	H	N	R	L	R	F	L	Q	N	S	L	G	A	V	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P
Template Known Secondary structure				T	T	T	T	T		S						T	T	T	T	T	T		S	S	S																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																											.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.																		.	.	.	.	330	.	.	.	.	.	.			.	.	.	340	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		L	S	A	A	L	E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	L	A	F	D	F	A	G	V	.	.	H	H	S	D	M	V
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		I	D	C	Y	L	C	N	R	G	L	K	T	L	H	V	R	M	E	K	H	F	K	N	G	M	A	V	A	Q	F	L	E	S	N	P	W	V	E	K	V	I	Y	P	G	L	P	S	H	P	Q	H	E	L	V	K	R	Q	C	T	G	C	T	G	M	V	T	F	Y	I	K	G	T	L	Q	H	A	E	I	F	L
Template Known Secondary structure												T	T																					T		T	T							T	T	S	T	T	S	T	T									S	S			S							S	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.															.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		T	L	L	A	E	Y	G	I	A	L	R	A	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	C	A	Q	P	L	L	A	E	L	G	V	.	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		K	N	L	K	L	F	T	L	A	E	S	L	G	G	F	E	S	L	A	E	L	P	A	I	M	T	H	A	S	V	L	K	N	D	R	D	V	L	G	I	S	D	T	L	I	R	L	S	V	G	L	E	D	E	E	D	L	L	E	D	L	D	Q	A	L	K	A	A
Template Known Secondary structure					S	S	S				S			S	S	S	S						G	G	G	T	T	T	T	T	S									T			T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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