Job Description Q46925 Confidence 99.92% Date Thu Jan 5 12:35:54 GMT 2012 Rank 158 Aligned Residues 305 % Identity 17% Template c1ibjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine beta-lyase; PDBTitle: crystal structure of cystathionine beta-lyase from arabidopsis2 thaliana Resolution 2.30 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	S	Q	F	A	E	A	Q	R	L	T	A	R	Y	E	A	A	R	E	K	V	A	Q	L	L	N	A	P	D	D	K	T	I	V	W	T	R	G	T	T	E	S	I	N	M	V	A	Q	C	Y	A	R	P	R	L	Q	P	G	D	E	I	I	V	S	V	A	E	H	H	A	N	L	V	P	W	L	M	V	A
Query Conservation
Alig confidence																														.	.	.																				.	.	.	.	.
Template Conservation																														.	.	.																				.	.	.	.	.
Template Sequence		E	N	G	P	Y	D	Y	T	R	S	G	N	P	T	R	D	A	L	E	S	L	L	A	K	L	D	K	A	.	.	.	D	R	A	F	C	F	T	S	G	M	A	A	L	S	A	V	T	H	L	.	.	.	.	.	I	K	N	G	E	E	I	V	A	G	D	D	V	Y	G	G	S	D	R	L	L	S	Q	V	V
Template Known Secondary structure					S		S	B	T	T	T																	T		.	.	.	S						S	S										T	T	.	.	.	.	.	S		T	T							T	T												T	G
Template Predicted Secondary structure																														.	.	.																				.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	T	G	A	K	V	V	K	L	P	L	N	A	Q	R	L	P	D	V	D	L	L	P	E	L	I	T	P	R	S	R	I	L	A	L	G	Q	M	S	N	V	T	G	G	C	P	D	L	A	R	A	I	T	F	A	H	S	A	G	M	V	V	M	V	D	G	A	Q	G	A	V	H	F	P	A	D	V	Q	Q
Query Conservation
Alig confidence															.	.	.	.	.																																																													.
Template Conservation															.	.	.	.	.																																																													.
Template Sequence		P	R	S	G	V	V	V	K	R	V	N	T	T	.	.	.	.	.	K	L	D	E	V	A	A	A	I	G	P	Q	T	K	L	V	W	L	E	S	P	T	N	P	R	Q	Q	I	S	D	I	R	K	I	S	E	M	A	H	A	Q	G	A	L	V	L	V	D	N	S	I	M	S	P	V	L	S	R	P	L	.	E
Template Known Secondary structure		G	G	G	T								T	T	.	.	.	.	.											T	T								S	S		T	T	T															T	T	T								T	T	T		T	T	T			G	G	.	G
Template Predicted Secondary structure															.	.	.	.	.																																																													.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.						.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		L	D	I	D	F	Y	A	F	S	G	H	K	L	Y	G	P	T	G	.	.	.	.	I	G	V	L	Y	G	K	S	E	L	L	E	A	M	S	P	W	L	G	G	G	K	M	V	H	E	V	S	F	D	G	F	T	T	Q	S	A	P	W	K	L	E	A	G	T	P	N	V	A	G	V	I	G	L	S	A	A	L
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	A	D	I	V	M	H	S	A	T	K	F	I	A	G	H	S	D	V	M	A	G	V	L	A	V	K	G	E	K	L	A	K	E	V	Y	F	L	Q	N	S	E	G	S	G	L	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	C	W	L
Template Known Secondary structure		G	T		S						T	T	T	T	T	T		S	S										S	S														T	T		B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.																											.	.	.	.	320
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.																		.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		E	W	L	A	D	Y	D	I	N	Q	A	E	S	W	S	R	S	L	A	T	L	A	E	D	A	L	A	K	R	P	G	F	R	S	F	R	C	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	L	A	F	D	F	A	G	V	H	.	H	S	D	M	V	T	L	L	A	E	Y
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		C	L	R	G	I	K	T	M	A	L	R	I	E	K	Q	Q	E	N	A	R	K	I	A	M	Y	L	S	S	H	P	R	V	K	K	V	Y	Y	A	G	L	P	D	H	P	G	H	H	L	H	F	S	Q	A	K	G	A	G	S	V	F	S	F	I	T	G	S	V	A	L	S	K	H	L	V	E	T	T	K	Y	F
Template Known Secondary structure							T	T																					T		T	T							T	T	S	T	T		T	T					T	T	S		S				S							S													S	S	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.																.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	A	L	R	A	G	Q	H	C	A	Q	P	L	L	A	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	G	T	L	R	A	S	F	A	P	Y	N	T	K	S	D	V	D	A	L	V	N	A	V	D	R	A	L	E	L	L
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		S	I	A	V	S	F	G	S	V	K	S	L	I	S	M	P	C	F	M	S	H	A	S	I	P	A	E	V	R	E	A	R	G	L	T	E	D	L	V	R	I	S	A	G	I	.	.	.	.	E	D	V	D	D	L	I	S	D	L	D	I	A	F	K	T	F
Template Known Secondary structure					S				S	S	S						T	T	T	T	T	T	T	T			S	S	T	T	T	T	S	S			T	T								S	.	.	.	.	S														T	T
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.					.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions