Return to main results Retrieve Phyre Job Id

Job DescriptionA4UR84
Confidence43.62%DateThu Jan 5 10:55:11 GMT 2012
Rank486Aligned Residues34
% Identity9%Templated1ulya_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Hypothetical protein PH1932
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190.........200.........210..
Predicted Secondary structure 









Query SS confidence 

































Query Sequence  EKMHDKEQFSESALENMVALSAKSQEYLTRATQR
Query Conservation     
        

  

     
   
 
 

 
Alig confidence 

































Template Conservation    

  
        


  
      
  

  
Template Sequence  RKILKLLRNKEXTISQLSEILGKTPQTIYHHIEK
Template Known Secondary structure  TT

B
T

Template Predicted Secondary structure 







Template SS confidence 

































   23......30.........40.........50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions