Return to main results Retrieve Phyre Job Id

Job DescriptionA4UR84
Confidence93.75%DateThu Jan 5 10:55:11 GMT 2012
Rank125Aligned Residues165
% Identity13%Templatec3fx3A_
PDB info PDB header:camp-binding proteinChain: A: PDB Molecule:cyclic nucleotide-binding protein; PDBTitle: structure of a putative camp-binding regulatory protein from2 silicibacter pomeroyi dss-3
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90.........100.........110.........120..
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN
Query Conservation      
  
  
               
    
                                                
Alig confidence 


















.....























































Template Conservation            

 
   
 .....     
 
  
 
        
          
   
               
   
Template Sequence  SQAVWRSYDRGETLFLQEE. . . . . KAQAIHVVIDGWVKLFRXTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAVTP
Template Known Secondary structure  TT

TT

TTS.....


S
TTS
TT
T


SSSSS
Template Predicted Secondary structure 








.....
































Template SS confidence 















































































   2930.........40....... ..50.........60.........70.........80.........90.........100...
 
   123......130.........140.........150.........160.........170.........180.........190.........200..
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  NAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS
Query Conservation           
                     
                           
        

  

     
Alig confidence 















































































Template Conservation                                                                      
   

  

 
Template Sequence  CEVXHIPSPVFVSLXRRDPEICISILATTFGHLHSLVAQLEQLKAQTGAQRVAEFLLELCDCEVTLPYDKXLIAGRLGXK
Template Known Secondary structure 










S
TTT

Template Predicted Secondary structure 





















Template SS confidence 















































































   104.....110.........120.........130.........140.........150.........160.........170.........180...
 
   203......210..
Predicted Secondary structure 
Query SS confidence 









Query Sequence  QEYLTRATQR
Query Conservation     
 
 

 
Alig confidence 









Template Conservation 
  


 
  
Template Sequence  PESLSRAFSR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 









   189190........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions