Job Description A4UR84 Confidence 72.95% Date Thu Jan 5 10:55:11 GMT 2012 Rank 336 Aligned Residues 87 % Identity 10% Template c2zhhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr; PDBTitle: crystal structure of soxr Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.									.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		S	A	L	E	N	M	V	A	L	S	A	K	S	Q	E	Y	L	T	R	.	.	.	.	.	.	.	.	A	T	Q	R	Y	Y	G	K	T	P	M	Q	I	I	N	E	I	R	I	N	F	A	K	K	Q	L	E	M	T	S	Y	S	V	T	D	I	A	F	E	A	G	Y	S	S	P	S	L	F	I	K	T	F	K
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.																														.																	.	.	.
Template Conservation																																																										.																	.	.	.
Template Sequence		L	T	P	G	E	V	A	K	R	S	G	V	A	V	S	A	L	H	F	Y	E	S	K	G	L	I	T	S	I	R	N	S	G	N	Q	R	R	Y	K	R	D	V	L	R	Y	V	A	I	I	K	I	A	Q	R	I	G	.	I	P	L	A	T	I	G	E	A	F	G	V	T	L	S	A	.	.	.	K	E	W	K
Template Known Secondary structure												T	S											T	T	S	S						T	T	T						T	T														T	T	.										T	T						.	.	.
Template Predicted Secondary structure																																																										.																	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	T	S	F	T	P	K	S	Y	R	K	K	L	T	E	F	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	S	S	Q	W	R	E	E	L	D	R	R	I	H	T	L	V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions