Job Description A4UR84 Confidence 89.53% Date Thu Jan 5 10:55:11 GMT 2012 Rank 246 Aligned Residues 42 % Identity 12% Template c2l8nA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional repressor cytr; PDBTitle: nmr structure of the cytidine repressor dna binding domain in presence2 of operator half-site dna Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	L	E	N	M	V	A	L	S	A	K	S	Q	E	Y	L	T	R	A	T	Q	R	Y	Y	G	K	T	P	M	Q	I	I	N	E	I	R	I	N	F	A	K	K	Q	L
Query Conservation
Alig confidence																																.	.	.
Template Conservation																																.	.	.
Template Sequence		A	T	M	K	D	V	A	L	K	A	K	V	S	T	A	T	V	S	R	A	L	M	N	P	D	K	V	S	Q	A	.	.	.	T	R	N	R	V	E	K	A	A	R	E	V
Template Known Secondary structure											T	T									T	T	T					S				.	.	.
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions