Email l.a.kelley@imperial.ac.uk Description P27297 Date Thu Jan 5 11:43:43 GMT 2012 Unique Job ID 0198c00ab246b151

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3fi7A_ 100.0 24 PDB header:hydrolase Chain: A: PDB Molecule:lmo1076 protein; PDBTitle: crystal structure of the autolysin auto (lmo1076) from listeria2 monocytogenes, catalytic domain 2 c2zycA_ 99.9 24 PDB header:hydrolase Chain: A: PDB Molecule:peptidoglycan hydrolase flgj; PDBTitle: crystal structure of peptidoglycan hydrolase from2 sphingomonas sp. a1 3 d1qsaa2 86.9 16 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Bacterial muramidase, catalytic domain 4 c3gxkB_ 71.0 15 PDB header:hydrolase Chain: B: PDB Molecule:goose-type lysozyme 1; PDBTitle: the crystal structure of g-type lysozyme from atlantic cod2 (gadus morhua l.) in complex with nag oligomers sheds new3 light on substrate binding and the catalytic mechanism.4 native structure to 1.9 5 d1gbsa_ 48.7 15 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:G-type lysozyme 6 c2kiqA_ 41.6 13 PDB header:transcription regulator Chain: A: PDB Molecule:transcription elongation regulator 1; PDBTitle: solution structure of the ff domain 2 of human transcription2 elongation factor ca150 7 c1u1iC_ 38.5 24 PDB header:isomerase Chain: C: PDB Molecule:myo-inositol-1-phosphate synthase; PDBTitle: myo-inositol phosphate synthase mips from a. fulgidus 8 c3mgwA_ 38.1 14 PDB header:hydrolase Chain: A: PDB Molecule:lysozyme g; PDBTitle: thermodynamics and structure of a salmon cold-active goose-type2 lysozyme 9 d1qusa_ 37.7 16 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Bacterial muramidase, catalytic domain 10 d2hj1a1 29.0 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:HI0395-like 11 c2hj1A_ 29.0 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a 3d domain-swapped dimer of protein hi0395 from2 haemophilus influenzae 12 c2y8pA_ 28.4 14 PDB header:lyase Chain: A: PDB Molecule:endo-type membrane-bound lytic murein transglycosylase a; PDBTitle: crystal structure of an outer membrane-anchored endolytic2 peptidoglycan lytic transglycosylase (mlte) from3 escherichia coli 13 c2k5jB_ 25.0 9 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein yiif; PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1 14 c2jucA_ 24.6 30 PDB header:unknown function Chain: A: PDB Molecule:pre-mrna-splicing factor urn1; PDBTitle: urn1 ff domain yeast 15 c3mzvB_ 24.2 18 PDB header:transferase Chain: B: PDB Molecule:decaprenyl diphosphate synthase; PDBTitle: crystal structure of a decaprenyl diphosphate synthase from2 rhodobacter capsulatus 16 c3oyrB_ 21.3 7 PDB header:transferase Chain: B: PDB Molecule:trans-isoprenyl diphosphate synthase; PDBTitle: crystal structure of polyprenyl synthase from caulobacter crescentus2 cb15 complexed with calcium and isoprenyl diphosphate 17 d1uzca_ 20.3 19 Fold:Another 3-helical bundle Superfamily:FF domain Family:FF domain 18 c2e71A_ 19.0 13 PDB header:transcription Chain: A: PDB Molecule:transcription elongation regulator 1; PDBTitle: solution structure of the second ff domain of human2 transcription factor ca150 19 c3frrA_ 18.6 17 PDB header:protein binding Chain: A: PDB Molecule:uncharacterized protein kiaa0174; PDBTitle: structure of human ist1(ntd) - (residues 1-189)(p21) 20 d1ppje2 17.6 27 Fold:Single transmembrane helix Superfamily:ISP transmembrane anchor Family:ISP transmembrane anchor 21 d2doea1 not modelled 16.9 17 Fold:Another 3-helical bundle Superfamily:FF domain Family:FF domain 22 d2cqna1 not modelled 15.5 17 Fold:Another 3-helical bundle Superfamily:FF domain Family:FF domain 23 d1v6ga1 not modelled 15.4 35 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 24 c3kevA_ not modelled 15.0 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:galieria sulfuraria dcun1 domain-containing protein; PDBTitle: x-ray crystal structure of a dcun1 domain-containing protein from2 galdieria sulfuraria 25 d2opoa1 not modelled 14.9 19 Fold:EF Hand-like Superfamily:EF-hand Family:Polcalcin 26 c3ggzC_ not modelled 14.1 24 PDB header:protein transport, endocytosis Chain: C: PDB Molecule:increased sodium tolerance protein 1; PDBTitle: crystal structure of s.cerevisiae ist1 n-terminal domain in2 complex with did2 mim motif 27 d1p35a_ not modelled 13.3 71 Fold:Baculovirus p35 protein Superfamily:Baculovirus p35 protein Family:Baculovirus p35 protein 28 c2ktgA_ not modelled 12.4 10 PDB header:ca-binding protein Chain: A: PDB Molecule:calmodulin, putative; PDBTitle: calmodulin like protein from entamoeba histolytica: solution structure2 and calcium binding properties of a partially folded protein 29 d1t6ca2 not modelled 11.9 18 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Ppx/GppA phosphatase 30 d2o5ha1 not modelled 11.4 14 Fold:NMB0513-like Superfamily:NMB0513-like Family:NMB0513-like 31 c2ckzC_ not modelled 11.1 22 PDB header:transferase Chain: C: PDB Molecule:dna-directed rna polymerase iii 18 kd PDBTitle: x-ray structure of rna polymerase iii subcomplex c17-c25. 32 c2doqA_ not modelled 10.7 2 PDB header:cell cycle Chain: A: PDB Molecule:cell division control protein 31; PDBTitle: crystal structure of sfi1p/cdc31p complex 33 d1tn4a_ not modelled 10.5 13 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 34 d1kyqa2 not modelled 10.3 7 Fold:Siroheme synthase middle domains-like Superfamily:Siroheme synthase middle domains-like Family:Siroheme synthase middle domains-like 35 d1u6za3 not modelled 9.8 6 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Ppx/GppA phosphatase 36 d1avsa_ not modelled 9.7 16 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 37 c2dimA_ not modelled 9.7 24 PDB header:dna binding protein Chain: A: PDB Molecule:cell division cycle 5-like protein; PDBTitle: solution structure of the myb_dna-binding domain of human2 cell division cycle 5-like protein 38 c1x41A_ not modelled 9.4 15 PDB header:transcription Chain: A: PDB Molecule:transcriptional adaptor 2-like, isoform b; PDBTitle: solution structure of the myb-like dna binding domain of2 human transcriptional adaptor 2-like, isoform b 39 c3bkhA_ not modelled 9.3 17 PDB header:hydrolase Chain: A: PDB Molecule:lytic transglycosylase; PDBTitle: crystal structure of the bacteriophage phikz lytic2 transglycosylase, gp144 40 c1idzA_ not modelled 9.3 25 PDB header:dna-binding protein Chain: A: PDB Molecule:mouse c-myb dna-binding domain repeat 3; PDBTitle: structure of myb transforming protein, nmr, 20 structures 41 d1bl0a2 not modelled 9.3 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 42 d1br1b_ not modelled 9.0 12 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 43 d2zdra2 not modelled 9.0 13 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:NeuB-like 44 d1d5ya2 not modelled 9.0 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 45 d1fi6a_ not modelled 8.9 10 Fold:EF Hand-like Superfamily:EF-hand Family:Eps15 homology domain (EH domain) 46 d1f54a_ not modelled 8.8 11 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 47 d1mbja_ not modelled 8.8 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 48 c1mbjA_ not modelled 8.8 21 PDB header:dna binding protein Chain: A: PDB Molecule:myb proto-oncogene protein; PDBTitle: mouse c-myb dna-binding domain repeat 3 49 d1n0ya_ not modelled 8.6 15 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 50 d2oc6a1 not modelled 8.5 19 Fold:Secretion chaperone-like Superfamily:YdhG-like Family:YdhG-like 51 c3ayhA_ not modelled 8.2 17 PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase iii subunit rpc9; PDBTitle: crystal structure of the c17/25 subcomplex from s. pombe rna2 polymerase iii 52 c2kl4A_ not modelled 8.2 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:bh2032 protein; PDBTitle: nmr structure of the protein nb7804a 53 c2k7bA_ not modelled 7.2 12 PDB header:metal binding protein Chain: A: PDB Molecule:calcium-binding protein 1; PDBTitle: nmr structure of mg2+-bound cabp1 n-domain 54 d1a04a1 not modelled 7.2 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:GerE-like (LuxR/UhpA family of transcriptional regulators) 55 c3ox6C_ not modelled 7.2 13 PDB header:calcium binding protein Chain: C: PDB Molecule:calcium-binding protein 1; PDBTitle: crystal structure of the calcium sensor calcium-binding protein 12 (cabp1) 56 c1e0fJ_ not modelled 7.2 28 PDB header:coagulation/crystal structure/heparin-b Chain: J: PDB Molecule:haemadin; PDBTitle: crystal structure of the human alpha-thrombin-haemadin2 complex: an exosite ii-binding inhibitor 57 d1lkja_ not modelled 7.2 10 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 58 d1zaca_ not modelled 7.2 14 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 59 d2tpta1 not modelled 7.1 17 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 60 c3j04E_ not modelled 7.1 13 PDB header:structural protein Chain: E: PDB Molecule:myosin regulatory light chain 2, smooth muscle major PDBTitle: em structure of the heavy meromyosin subfragment of chick smooth2 muscle myosin with regulatory light chain in phosphorylated state 61 d1sw8a_ not modelled 7.0 13 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 62 c1e0fK_ not modelled 6.8 28 PDB header:coagulation/crystal structure/heparin-b Chain: K: PDB Molecule:haemadin; PDBTitle: crystal structure of the human alpha-thrombin-haemadin2 complex: an exosite ii-binding inhibitor 63 c1e0fI_ not modelled 6.8 28 PDB header:coagulation/crystal structure/heparin-b Chain: I: PDB Molecule:haemadin; PDBTitle: crystal structure of the human alpha-thrombin-haemadin2 complex: an exosite ii-binding inhibitor 64 d1e0fi_ not modelled 6.8 28 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Leech antihemostatic proteins Family:Hirudin-like 65 d1gv2a2 not modelled 6.8 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 66 c3cvgC_ not modelled 6.7 12 PDB header:metal binding protein Chain: C: PDB Molecule:putative metal binding protein; PDBTitle: crystal structure of a periplasmic putative metal binding protein 67 d1w0ta_ not modelled 6.7 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:DNA-binding domain of telomeric protein 68 c1mseC_ not modelled 6.7 25 PDB header:dna binding protein/dna Chain: C: PDB Molecule:c-myb dna-binding domain; PDBTitle: solution structure of a specific dna complex of the myb dna-2 binding domain with cooperative recognition helices 69 c2xqoA_ not modelled 6.7 60 PDB header:hydrolase Chain: A: PDB Molecule:cellulosome enzyme, dockerin type i; PDBTitle: ctcel124: a cellulase from clostridium thermocellum 70 c1xuzA_ not modelled 6.6 13 PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol 71 c3cerD_ not modelled 6.6 13 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:possible exopolyphosphatase-like protein; PDBTitle: crystal structure of the exopolyphosphatase-like protein2 q8g5j2. northeast structural genomics consortium target3 blr13 72 c3sggA_ not modelled 6.6 10 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical hydrolase; PDBTitle: crystal structure of a hypothetical hydrolase (bt_2193) from2 bacteroides thetaiotaomicron vpi-5482 at 1.25 a resolution 73 c2ggmA_ not modelled 6.5 6 PDB header:cell cycle Chain: A: PDB Molecule:centrin-2; PDBTitle: human centrin 2 xeroderma pigmentosum group c protein2 complex 74 d1gm5a1 not modelled 6.5 27 Fold:Four-helical up-and-down bundle Superfamily:RecG, N-terminal domain Family:RecG, N-terminal domain 75 c3p45F_ not modelled 6.4 28 PDB header:hydrolase Chain: F: PDB Molecule:caspase-6; PDBTitle: crystal structure of apo-caspase-6 at physiological ph 76 d1h4ba_ not modelled 6.4 20 Fold:EF Hand-like Superfamily:EF-hand Family:Polcalcin 77 c2l7eA_ not modelled 6.3 80 PDB header:transcription Chain: A: PDB Molecule:transcription initiation factor tfiid subunit 14; PDBTitle: the structure of a domain from yeast 78 c3mseB_ not modelled 6.2 9 PDB header:transferase Chain: B: PDB Molecule:calcium-dependent protein kinase, putative; PDBTitle: crystal structure of c-terminal domain of pf110239. 79 d1guua_ not modelled 6.2 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 80 c1guuA_ not modelled 6.2 17 PDB header:transcription Chain: A: PDB Molecule:myb proto-oncogene protein; PDBTitle: crystal structure of c-myb r1 81 c3bmbB_ not modelled 6.1 13 PDB header:rna binding protein Chain: B: PDB Molecule:regulator of nucleoside diphosphate kinase; PDBTitle: crystal structure of a new rna polymerase interacting2 protein 82 d1kbhb_ not modelled 6.0 22 Fold:Nuclear receptor coactivator interlocking domain Superfamily:Nuclear receptor coactivator interlocking domain Family:Nuclear receptor coactivator interlocking domain 83 c2krcA_ not modelled 6.0 6 PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase subunit delta; PDBTitle: solution structure of the n-terminal domain of bacillus2 subtilis delta subunit of rna polymerase 84 d1pdza2 not modelled 5.9 18 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 85 c3osgA_ not modelled 5.9 21 PDB header:transcription/dna Chain: A: PDB Molecule:myb21; PDBTitle: the structure of protozoan parasite trichomonas vaginalis myb2 in2 complex with mre-1-12 dna 86 d1o20a_ not modelled 5.9 16 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 87 d1eh1a_ not modelled 5.8 24 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 88 c2kn2A_ not modelled 5.7 12 PDB header:metal binding protein Chain: A: PDB Molecule:calmodulin; PDBTitle: solution structure of the c-terminal domain of soybean calmodulin2 isoform 4 fused with the calmodulin-binding domain of ntmkp1 89 c3mn2B_ not modelled 5.7 16 PDB header:transcription regulator Chain: B: PDB Molecule:probable arac family transcriptional regulator; PDBTitle: the crystal structure of a probable arac family transcriptional2 regulator from rhodopseudomonas palustris cga009 90 d1q8ca_ not modelled 5.7 32 Fold:NusB-like Superfamily:NusB-like Family:Hypothetical protein MG027 91 c2amiA_ not modelled 5.6 7 PDB header:cell cycle Chain: A: PDB Molecule:caltractin; PDBTitle: solution structure of the calcium-loaded n-terminal sensor2 domain of centrin 92 c1eptB_ not modelled 5.6 71 PDB header:hydrolase (serine protease) Chain: B: PDB Molecule:porcine e-trypsin; PDBTitle: refined 1.8 angstroms resolution crystal structure of2 porcine epsilon-trypsin 93 d2doda1 not modelled 5.6 19 Fold:Another 3-helical bundle Superfamily:FF domain Family:FF domain 94 d2pq3a1 not modelled 5.5 15 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 95 d1a5ja1 not modelled 5.5 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 96 c2bsjB_ not modelled 5.5 50 PDB header:chaperone Chain: B: PDB Molecule:chaperone protein syct; PDBTitle: native crystal structure of the type iii secretion2 chaperone syct from yersinia enterocolitica 97 d1dvia_ not modelled 5.4 8 Fold:EF Hand-like Superfamily:EF-hand Family:Penta-EF-hand proteins 98 d1a5ja2 not modelled 5.3 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 99 d1w0ua_ not modelled 5.3 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:DNA-binding domain of telomeric protein