Job Description P0ACA1 Confidence 99.97% Date Thu Jan 5 11:17:42 GMT 2012 Rank 8 Aligned Residues 188 % Identity 19% Template c3lykA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:stringent starvation protein a homolog; PDBTitle: structure of stringent starvation protein a homolog from2 haemophilus influenzae Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	V	G	S	Y	T	S	P	F	V	R	K	L	S	I	L	L	L	E	K	G	I	T	F	E	F	I	N	E	L	P	Y	N	A	D	N	G	V	A	Q	F	N	P	L	G	K	V	P	V	L	V	T	E	E	G	E	C	W	F	D	S	P	I	I	A	E	Y	I	E	L	M	N	V	A	P	A	M	L	P
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		T	L	F	S	N	K	D	D	I	Y	C	H	Q	V	K	I	V	L	A	E	K	G	V	L	Y	E	N	A	E	V	D	L	Q	A	L	P	E	D	L	X	E	L	N	P	Y	G	T	V	P	T	L	V	.	D	R	D	L	V	L	F	N	S	R	I	I	X	E	Y	L	D	E	R	F	P	H	P	P	L	X	Q
Template Known Secondary structure							T	T															T										T	T	S										T	T			S					.		T	T					S												S		S	S			S
Template Predicted Secondary structure																																																						.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		R	D	P	L	E	S	L	R	V	R	K	I	E	A	L	A	D	G	I	M	D	A	G	L	V	S	V	R	E	Q	A	R	P	A	A	Q	Q	S	E	D	E	L	L	R	Q	R	E	K	I	N	R	S	L	D	V	L	E	G	Y	L	V	D	G	.	T	L	K	T	D	T	V	N	L	A	T	I	A	I	A	C
Query Conservation																																																																	.
Alig confidence																																.	.	.	.	.	.	.																											.
Template Conservation																																.	.	.	.	.	.	.
Template Sequence		V	Y	P	V	S	R	A	K	D	R	L	L	X	L	R	I	E	Q	D	W	Y	P	T	L	A	K	A	E	N	G	.	.	.	.	.	.	.	T	E	K	E	K	T	S	A	L	K	Q	L	K	E	E	L	L	G	I	A	P	I	F	Q	Q	X	P	Y	F	X	N	E	E	F	G	L	V	D	C	Y	V	A	P
Template Known Secondary structure		S	S																		T										S	.	.	.	.	.	.	.																			T							S	S	B	T	T	B	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	G	Y	L	N	F	R	R	V	A	P	G	W	C	V	D	R	P	H	L	V	K	L	V	E	N	L	F	S	R	E	S	F	A	R	T	E
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		L	L	W	K	L	K	H	L	G	V	E	F	T	.	G	T	G	S	K	A	I	K	A	Y	X	E	R	V	F	T	R	D	S	F	L	Q	S	V
Template Known Secondary structure								T	T	T					.	S	T	T													T	S							T
Template Predicted Secondary structure															.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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