Job Description P0ACA1 Confidence 99.67% Date Thu Jan 5 11:17:42 GMT 2012 Rank 86 Aligned Residues 154 % Identity 16% Template c2uz8A_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:eukaryotic translation elongation factor 1 PDBTitle: the crystal structure of p18, human translation elongation2 factor 1 epsilon 1 Resolution 2.0 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	K	L	S	I	L	L	L	E	K	G	I	T	F	E	F	I	N	E	L	P	Y	N	A	D	N	G	V	A	Q	F	N	P	L	G	K	V	P	V	L	V	T	E	E	G	E	C	W	F	D	S	P	I	I	A	E	Y	I	E	L	M	N	V	A	P	A	M	L	P	R	D	P	L	E	S	L	R	V	R
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.
Template Sequence		A	A	A	A	E	L	S	L	L	E	K	S	L	G	L	S	K	G	N	K	Y	.	.	.	.	.	.	.	.	.	S	A	Q	G	E	R	Q	I	P	V	L	Q	T	N	N	G	P	S	L	X	G	L	T	T	I	A	A	H	L	V	K	Q	A	N	K	E	Y	L	L	G	S	T	A	E	E	K	A	X	V	Q
Template Known Secondary structure														T	T			S					.	.	.	.	.	.	.	.	.				T	T	T	T							S	S						S												T	T		G	G	G	G		S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.										.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	E	A	L	A	D	G	I	M	D	A	G	L	V	S	V	R	E	Q	A	R	P	A	A	Q	Q	S	E	D	E	L	L	R	Q	R	E	K	I	N	R	S	L	D	V	L	E	G	Y	L	V	D	G	T	L	K	T	D	T	V	N	L	A	T	I	A	I	A	C	A	V	G	Y	L	N	F	R	R	V	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		Q	W	L	E	Y	R	V	T	Q	V	D	N	D	I	H	T	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	D	L	N	S	Y	L	E	D	K	V	Y	L	T	G	Y	N	F	T	L	A	D	I	L	L	Y	Y	G	L	H	R	F	I	V	D	.	L	T
Template Known Secondary structure											T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							G	G	G		S	S	T	T	S	S	S																	T	T	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	W	C	V	D	R	P	H	L	V	K	L	V	E	N	L	F	S	R	E	S	F	A	R	T	E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	E	K	E	K	Y	L	N	V	S	R	W	F	C	H	I	Q	H	Y	P	G	I	R	Q	H	L	S
Template Known Secondary structure								T													S	T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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