Job Description P0ACA1 Confidence 99.88% Date Thu Jan 5 11:17:42 GMT 2012 Rank 84 Aligned Residues 185 % Identity 18% Template c1z9hB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:membrane-associated prostaglandin e synthase-2; PDBTitle: microsomal prostaglandin e synthase type-2 Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		M	K	L	V	G	S	Y	T	S	P	F	V	R	K	L	S	I	L	L	L	E	K	G	I	T	F	E	F	I	N	E	L	P	Y	N	A	D	N	G	V	A	Q	F	N	P	L	G	K	V	P	V	L	V	.	.	.	T	E	E	G	E	C	W	F	D	S	P	I	I	A	E	Y	I	E	L	M	N	V	A	P
Query Conservation																																																							.	.	.
Alig confidence																																								.	.														.	.	.
Template Conservation																																								.	.
Template Sequence		L	T	L	Y	Q	Y	K	T	C	P	F	C	S	K	V	R	A	F	L	D	F	H	A	L	P	Y	Q	V	V	E	V	N	P	V	L	R	A	E	.	.	I	K	F	S	S	Y	R	K	V	P	I	L	V	A	Q	E	G	E	S	S	Q	Q	L	N	D	S	S	V	I	I	S	A	L	K	T	Y	L	V	S	G
Template Known Secondary structure								T	T														T	T										T	T	T		G	G	.	.	G	T	T		S			S	S								T	T							S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.																																								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		A	M	L	P	R	D	P	L	E	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	R	K	I	E	A	L	A	D	G	I	M	D	A	G	L	V	S	V	R	E	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	P	L	E	E	I	I	T	Y	Y	P	A	M	K	A	V	N	D	Q	G	K	E	V	T	E	F	G	N	K	Y	W	L	M	L	N	E	K	E	A	Q	Q	V	Y	S	G	K	E	A	R	T	E	E	M	K	W	R	Q	W	A	D	D	W	L	V	H	L	I	S	P	N	V	Y	R	T	P	T	E	A	L	A
Template Known Secondary structure								G	G	G	S								T	T	S							T	T	T	T														S	S																	T	T	G	G	G	T					S	S	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
																																		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	R	P	A	A	Q	Q	S	E	D	E	L	L	R	Q	R	E	K	I	N	R	S	L	D	V	L	E	G	Y	L	V	D	G	T	L	K	T	D	T	V	N	L	A	T	I	A	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																																											.	.
Template Sequence		S	F	D	Y	I	V	R	E	G	K	F	G	A	V	E	G	A	V	A	K	Y	M	G	A	A	A	M	Y	L	I	S	K	R	L	K	S	R	H	R	L	Q	D	N	V	R	E	D	L	Y	E	A	A	D	K	W	V	A	.	.	A	V	G	K	D	R	P	F	M	G	G	Q	K	P	N	L	A	D	L	A	V
Template Known Secondary structure										S																													T	T			S	S															.	.				S	S		S	B	T	T	B	T	S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	A	V	G	Y	L	N	F	R	R	V	A	P	G	W	C	V	D	R	P	H	L	V	K	L	V	E	N	L	F	S
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		Y	G	V	L	R	V	M	E	G	L	D	A	F	D	D	L	M	Q	.	H	T	H	I	Q	P	W	Y	L	R	V	E	R
Template Known Secondary structure							T	T	T	T	S									.			S
Template Predicted Secondary structure																				.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions